Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 AC106820.3-201ENST00000561653 397 ntBASIC12.09□□□□□ -0.47
BEST4Q8NFU0 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
BEST4Q8NFU0 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC12.09□□□□□ -0.47
BEST4Q8NFU0 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC12.09□□□□□ -0.47
BEST4Q8NFU0 AC009955.4-201ENST00000597192 544 ntBASIC12.09□□□□□ -0.47
BEST4Q8NFU0 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC12.09□□□□□ -0.47
BEST4Q8NFU0 AC009118.2-201ENST00000613275 655 ntBASIC12.09□□□□□ -0.47
BEST4Q8NFU0 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC12.09□□□□□ -0.47
BEST4Q8NFU0 CR392039.2-201ENST00000623182 509 ntBASIC12.09□□□□□ -0.47
BEST4Q8NFU0 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC12.09□□□□□ -0.47
BEST4Q8NFU0 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
BEST4Q8NFU0 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
BEST4Q8NFU0 AC068580.3-201ENST00000449248 2015 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
BEST4Q8NFU0 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
BEST4Q8NFU0 RNF170-206ENST00000527424 3880 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
BEST4Q8NFU0 IP6K1-202ENST00000395238 4117 ntTSL 3 BASIC12.09□□□□□ -0.47
BEST4Q8NFU0 HSP90AA1-202ENST00000334701 3510 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
BEST4Q8NFU0 RETREG3-201ENST00000309428 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
BEST4Q8NFU0 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
BEST4Q8NFU0 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
BEST4Q8NFU0 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
BEST4Q8NFU0 UBP1-204ENST00000447368 3669 ntAPPRIS ALT1 TSL 2 BASIC12.09□□□□□ -0.47
BEST4Q8NFU0 VPS52-218ENST00000482399 3338 ntTSL 2 BASIC12.09□□□□□ -0.47
BEST4Q8NFU0 EDARADD-202ENST00000359362 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
BEST4Q8NFU0 CSNK1G1-209ENST00000634811 2592 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
BEST4Q8NFU0 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
BEST4Q8NFU0 SP7-201ENST00000303846 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
BEST4Q8NFU0 VMP1-201ENST00000262291 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
BEST4Q8NFU0 STK40-203ENST00000373130 3628 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
BEST4Q8NFU0 MKNK1-201ENST00000341183 2612 ntTSL 5 BASIC12.08□□□□□ -0.47
BEST4Q8NFU0 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
BEST4Q8NFU0 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC12.08□□□□□ -0.47
BEST4Q8NFU0 WIPF3-201ENST00000242140 4184 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.47
BEST4Q8NFU0 GMEB2-201ENST00000266068 4559 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
BEST4Q8NFU0 AKAP8-201ENST00000269701 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
BEST4Q8NFU0 ETAA1-201ENST00000272342 3418 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
BEST4Q8NFU0 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
BEST4Q8NFU0 DRG2-202ENST00000395726 1897 ntTSL 5 BASIC12.08□□□□□ -0.48
BEST4Q8NFU0 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
BEST4Q8NFU0 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
BEST4Q8NFU0 WNK1-202ENST00000340908 11208 ntTSL 5 BASIC12.08□□□□□ -0.48
BEST4Q8NFU0 MPP4-203ENST00000396886 2250 ntTSL 2 BASIC12.08□□□□□ -0.48
BEST4Q8NFU0 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
BEST4Q8NFU0 ABCB9-211ENST00000540285 3330 ntTSL 2 BASIC12.08□□□□□ -0.48
BEST4Q8NFU0 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
BEST4Q8NFU0 VDR-201ENST00000229022 4773 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
BEST4Q8NFU0 MRVI1-202ENST00000424001 5815 ntTSL 5 BASIC12.08□□□□□ -0.48
BEST4Q8NFU0 CTAGE10P-201ENST00000318353 2408 ntBASIC12.08□□□□□ -0.48
BEST4Q8NFU0 ESRRB-204ENST00000509242 2849 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
BEST4Q8NFU0 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
BEST4Q8NFU0 DNAH2-202ENST00000570791 2994 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
BEST4Q8NFU0 CAMTA2-204ENST00000414043 4589 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
BEST4Q8NFU0 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
BEST4Q8NFU0 DRAM1-201ENST00000258534 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
BEST4Q8NFU0 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
BEST4Q8NFU0 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
BEST4Q8NFU0 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC12.08□□□□□ -0.48
BEST4Q8NFU0 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
BEST4Q8NFU0 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
BEST4Q8NFU0 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
BEST4Q8NFU0 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC12.08□□□□□ -0.48
BEST4Q8NFU0 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC12.08□□□□□ -0.48
BEST4Q8NFU0 URGCP-206ENST00000446958 365 ntTSL 2 BASIC12.08□□□□□ -0.48
BEST4Q8NFU0 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
BEST4Q8NFU0 CICP12-201ENST00000455801 843 ntBASIC12.08□□□□□ -0.48
BEST4Q8NFU0 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC12.08□□□□□ -0.48
BEST4Q8NFU0 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
BEST4Q8NFU0 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC12.08□□□□□ -0.48
BEST4Q8NFU0 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC12.08□□□□□ -0.48
BEST4Q8NFU0 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
BEST4Q8NFU0 AC027601.3-201ENST00000622907 509 ntBASIC12.08□□□□□ -0.48
BEST4Q8NFU0 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
BEST4Q8NFU0 FBF1-210ENST00000592193 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
BEST4Q8NFU0 HLA-E-201ENST00000376630 2601 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
BEST4Q8NFU0 TXNDC17-201ENST00000250101 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
BEST4Q8NFU0 SEMA6D-202ENST00000354744 5931 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
BEST4Q8NFU0 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
BEST4Q8NFU0 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
BEST4Q8NFU0 CNTNAP5-202ENST00000431078 5284 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
BEST4Q8NFU0 TIAM1-201ENST00000286827 7200 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
BEST4Q8NFU0 PNPLA8-208ENST00000453144 3366 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
BEST4Q8NFU0 GRIA4-202ENST00000393125 2994 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
BEST4Q8NFU0 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
BEST4Q8NFU0 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
BEST4Q8NFU0 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC12.08□□□□□ -0.48
BEST4Q8NFU0 SEPT9-207ENST00000449803 3996 ntTSL 2 BASIC12.08□□□□□ -0.48
BEST4Q8NFU0 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
BEST4Q8NFU0 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC12.08□□□□□ -0.48
BEST4Q8NFU0 GLO1-201ENST00000373365 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
BEST4Q8NFU0 DDX5-210ENST00000578804 2021 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
BEST4Q8NFU0 KCNK10-202ENST00000319231 2725 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
BEST4Q8NFU0 PERP-201ENST00000421351 4290 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
BEST4Q8NFU0 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
BEST4Q8NFU0 NRF1-202ENST00000311967 2481 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
BEST4Q8NFU0 PLD5-204ENST00000442594 3305 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
BEST4Q8NFU0 KIF3A-208ENST00000618515 3333 ntTSL 5 BASIC12.08□□□□□ -0.48
BEST4Q8NFU0 NCBP1-202ENST00000375147 5178 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
BEST4Q8NFU0 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
BEST4Q8NFU0 DAXX-202ENST00000374542 2613 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
BEST4Q8NFU0 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC12.07□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms