Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 KCNJ14-202ENST00000391884 3990 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC25Q86WR0 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC14.45□□□□□ -0.1
CCDC25Q86WR0 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC25Q86WR0 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC25Q86WR0 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC14.44□□□□□ -0.1
CCDC25Q86WR0 AC092117.1-201ENST00000621230 3250 ntBASIC14.44□□□□□ -0.1
CCDC25Q86WR0 NOS3-201ENST00000297494 4388 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC25Q86WR0 SGSM3-201ENST00000248929 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC25Q86WR0 FAM214B-205ENST00000488109 2999 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CCDC25Q86WR0 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
CCDC25Q86WR0 KCNJ11-201ENST00000339994 2801 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
CCDC25Q86WR0 EPHA1-201ENST00000275815 3363 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC25Q86WR0 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC14.44□□□□□ -0.1
CCDC25Q86WR0 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC25Q86WR0 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC25Q86WR0 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC25Q86WR0 PPP4R3B-206ENST00000616407 4385 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC25Q86WR0 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC25Q86WR0 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC25Q86WR0 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC25Q86WR0 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
CCDC25Q86WR0 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC14.44□□□□□ -0.1
CCDC25Q86WR0 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC14.44□□□□□ -0.1
CCDC25Q86WR0 CNN2P8-201ENST00000421872 913 ntBASIC14.44□□□□□ -0.1
CCDC25Q86WR0 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC14.44□□□□□ -0.1
CCDC25Q86WR0 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC14.44□□□□□ -0.1
CCDC25Q86WR0 RN7SL752P-201ENST00000463779 287 ntBASIC14.44□□□□□ -0.1
CCDC25Q86WR0 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC25Q86WR0 USP32P1-208ENST00000506594 1164 ntBASIC14.44□□□□□ -0.1
CCDC25Q86WR0 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC14.44□□□□□ -0.1
CCDC25Q86WR0 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC14.44□□□□□ -0.1
CCDC25Q86WR0 KRT90P-201ENST00000549264 1064 ntBASIC14.44□□□□□ -0.1
CCDC25Q86WR0 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC25Q86WR0 NAA38-206ENST00000576384 424 ntTSL 2 BASIC14.44□□□□□ -0.1
CCDC25Q86WR0 MAP4K2-201ENST00000294066 7178 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC25Q86WR0 HDAC7-202ENST00000354334 4065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC25Q86WR0 HDAC7-201ENST00000080059 4095 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC25Q86WR0 CYYR1-201ENST00000299340 3101 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC25Q86WR0 FOXN4-202ENST00000355216 2958 ntTSL 2 BASIC14.44□□□□□ -0.1
CCDC25Q86WR0 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC14.44□□□□□ -0.1
CCDC25Q86WR0 ZNF493-208ENST00000599461 1769 ntBASIC14.44□□□□□ -0.1
CCDC25Q86WR0 ALDH7A1-234ENST00000637782 1773 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
CCDC25Q86WR0 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC25Q86WR0 PPP4R3B-203ENST00000611717 5243 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC25Q86WR0 CCDC14-220ENST00000488653 4156 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC25Q86WR0 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC14.44□□□□□ -0.1
CCDC25Q86WR0 PER1-202ENST00000354903 3115 ntTSL 2 BASIC14.44□□□□□ -0.1
CCDC25Q86WR0 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC25Q86WR0 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC25Q86WR0 AC008620.2-201ENST00000510294 1569 ntBASIC14.43□□□□□ -0.1
CCDC25Q86WR0 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC14.43□□□□□ -0.1
CCDC25Q86WR0 AL139158.3-201ENST00000641212 1562 ntBASIC14.43□□□□□ -0.1
CCDC25Q86WR0 STK26-204ENST00000481105 1835 ntTSL 2 BASIC14.43□□□□□ -0.1
CCDC25Q86WR0 ANO6-203ENST00000425752 3558 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC25Q86WR0 KCNMA1-208ENST00000372440 3849 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CCDC25Q86WR0 KCNMA1-227ENST00000638203 3840 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CCDC25Q86WR0 KCNMA1-232ENST00000638306 3811 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CCDC25Q86WR0 KCNMA1-233ENST00000638351 3849 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CCDC25Q86WR0 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC25Q86WR0 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC25Q86WR0 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC25Q86WR0 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CCDC25Q86WR0 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC25Q86WR0 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC25Q86WR0 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC25Q86WR0 SLC45A2-201ENST00000296589 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC25Q86WR0 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC14.43□□□□□ -0.1
CCDC25Q86WR0 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CCDC25Q86WR0 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CCDC25Q86WR0 PPFIBP1-215ENST00000542629 3208 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC25Q86WR0 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC25Q86WR0 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC25Q86WR0 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CCDC25Q86WR0 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC14.43□□□□□ -0.1
CCDC25Q86WR0 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC25Q86WR0 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC14.43□□□□□ -0.1
CCDC25Q86WR0 KLF2P1-201ENST00000447438 1042 ntBASIC14.43□□□□□ -0.1
CCDC25Q86WR0 AC007551.1-201ENST00000457394 519 ntBASIC14.43□□□□□ -0.1
CCDC25Q86WR0 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
CCDC25Q86WR0 AP006547.1-201ENST00000563435 692 ntBASIC14.43□□□□□ -0.1
CCDC25Q86WR0 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CCDC25Q86WR0 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC14.43□□□□□ -0.1
CCDC25Q86WR0 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC14.43□□□□□ -0.1
CCDC25Q86WR0 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC14.43□□□□□ -0.1
CCDC25Q86WR0 MKL1-210ENST00000614754 3917 ntTSL 5 BASIC14.43□□□□□ -0.1
CCDC25Q86WR0 GRIN1-205ENST00000371555 4003 ntTSL 5 BASIC14.43□□□□□ -0.1
CCDC25Q86WR0 GNPNAT1-201ENST00000216410 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC25Q86WR0 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC14.43□□□□□ -0.1
CCDC25Q86WR0 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC25Q86WR0 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC25Q86WR0 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CCDC25Q86WR0 HSPA12A-205ENST00000635765 5841 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CCDC25Q86WR0 CACNB4-210ENST00000539935 8378 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC25Q86WR0 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC25Q86WR0 CUL4A-203ENST00000375441 4037 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC25Q86WR0 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC14.43□□□□□ -0.1
CCDC25Q86WR0 USP31-203ENST00000567975 2142 ntTSL 2 BASIC14.42□□□□□ -0.1
CCDC25Q86WR0 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC14.42□□□□□ -0.1
CCDC25Q86WR0 MOCS1-204ENST00000373188 3358 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC25Q86WR0 TBX4-202ENST00000393853 3398 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms