Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 AC100756.1-201ENST00000562736 682 ntBASIC13.13□□□□□ -0.31
LPCAT4Q643R3 AC140878.1-201ENST00000565277 250 ntBASIC13.13□□□□□ -0.31
LPCAT4Q643R3 AC138749.3-201ENST00000567691 622 ntBASIC13.13□□□□□ -0.31
LPCAT4Q643R3 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
LPCAT4Q643R3 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC13.13□□□□□ -0.31
LPCAT4Q643R3 AC116165.1-201ENST00000611806 668 ntBASIC13.13□□□□□ -0.31
LPCAT4Q643R3 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC13.13□□□□□ -0.31
LPCAT4Q643R3 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC13.13□□□□□ -0.31
LPCAT4Q643R3 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
LPCAT4Q643R3 AC134684.3-201ENST00000641758 218 ntBASIC13.13□□□□□ -0.31
LPCAT4Q643R3 NDRG4-204ENST00000394282 3626 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LPCAT4Q643R3 ARID4A-206ENST00000431317 5783 ntTSL 5 BASIC13.13□□□□□ -0.31
LPCAT4Q643R3 ATXN10-201ENST00000252934 3329 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LPCAT4Q643R3 OSBPL7-202ENST00000392507 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LPCAT4Q643R3 BBOF1-201ENST00000394009 3106 ntAPPRIS P2 TSL 2 BASIC13.13□□□□□ -0.31
LPCAT4Q643R3 PRAMENP-201ENST00000337471 3038 ntTSL 2 BASIC13.13□□□□□ -0.31
LPCAT4Q643R3 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LPCAT4Q643R3 PTGR2-204ENST00000555228 2543 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
LPCAT4Q643R3 ZNF621-201ENST00000310898 2404 ntTSL 2 BASIC13.13□□□□□ -0.31
LPCAT4Q643R3 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LPCAT4Q643R3 TRIM68-201ENST00000300747 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LPCAT4Q643R3 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
LPCAT4Q643R3 ATP2A3-203ENST00000359983 3290 ntTSL 5 BASIC13.13□□□□□ -0.31
LPCAT4Q643R3 REST-208ENST00000619101 7114 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LPCAT4Q643R3 C1QTNF9B-202ENST00000382140 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LPCAT4Q643R3 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
LPCAT4Q643R3 GBP1P1-201ENST00000394662 1740 ntBASIC13.13□□□□□ -0.31
LPCAT4Q643R3 GPC4-201ENST00000370828 4960 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LPCAT4Q643R3 ARAP1-209ENST00000455638 2683 ntTSL 5 BASIC13.13□□□□□ -0.31
LPCAT4Q643R3 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC13.13□□□□□ -0.31
LPCAT4Q643R3 CPT1A-205ENST00000539743 2382 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
LPCAT4Q643R3 HACD3-201ENST00000261875 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LPCAT4Q643R3 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LPCAT4Q643R3 CHST15-201ENST00000346248 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LPCAT4Q643R3 LEPR-201ENST00000344610 2935 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LPCAT4Q643R3 TXNDC2-202ENST00000357775 2830 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
LPCAT4Q643R3 AKNA-201ENST00000223791 4414 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
LPCAT4Q643R3 ZIC3-201ENST00000287538 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LPCAT4Q643R3 DMTF1-201ENST00000331242 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LPCAT4Q643R3 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
LPCAT4Q643R3 PRKG2-201ENST00000264399 4822 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
LPCAT4Q643R3 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC13.12□□□□□ -0.31
LPCAT4Q643R3 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
LPCAT4Q643R3 CCDC112-201ENST00000379611 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
LPCAT4Q643R3 SLC25A25-205ENST00000432073 3678 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LPCAT4Q643R3 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC13.12□□□□□ -0.31
LPCAT4Q643R3 ZNF461-201ENST00000360357 2361 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
LPCAT4Q643R3 CACNB3-204ENST00000547230 2395 ntTSL 3 BASIC13.12□□□□□ -0.31
LPCAT4Q643R3 ADRA1A-210ENST00000519229 1838 ntTSL 5 BASIC13.12□□□□□ -0.31
LPCAT4Q643R3 TP53I11-203ENST00000395648 3381 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
LPCAT4Q643R3 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC13.12□□□□□ -0.31
LPCAT4Q643R3 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.12□□□□□ -0.31
LPCAT4Q643R3 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
LPCAT4Q643R3 TSEN15P1-201ENST00000423257 515 ntBASIC13.12□□□□□ -0.31
LPCAT4Q643R3 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC13.12□□□□□ -0.31
LPCAT4Q643R3 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
LPCAT4Q643R3 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LPCAT4Q643R3 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC13.12□□□□□ -0.31
LPCAT4Q643R3 AC009477.1-201ENST00000452936 217 ntBASIC13.12□□□□□ -0.31
LPCAT4Q643R3 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
LPCAT4Q643R3 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC13.12□□□□□ -0.31
LPCAT4Q643R3 AC009407.1-201ENST00000568958 598 ntBASIC13.12□□□□□ -0.31
LPCAT4Q643R3 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC13.12□□□□□ -0.31
LPCAT4Q643R3 AC021016.3-201ENST00000608367 477 ntBASIC13.12□□□□□ -0.31
LPCAT4Q643R3 AC004790.1-201ENST00000612686 536 ntBASIC13.12□□□□□ -0.31
LPCAT4Q643R3 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
LPCAT4Q643R3 AL590560.3-201ENST00000623350 461 ntBASIC13.12□□□□□ -0.31
LPCAT4Q643R3 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
LPCAT4Q643R3 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
LPCAT4Q643R3 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LPCAT4Q643R3 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LPCAT4Q643R3 DYNC1LI1-201ENST00000273130 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LPCAT4Q643R3 ANGEL2-208ENST00000535388 2517 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LPCAT4Q643R3 CSF3R-204ENST00000373104 2953 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LPCAT4Q643R3 LINC00664-203ENST00000599078 3760 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LPCAT4Q643R3 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC13.12□□□□□ -0.31
LPCAT4Q643R3 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
LPCAT4Q643R3 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
LPCAT4Q643R3 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC13.12□□□□□ -0.31
LPCAT4Q643R3 SETD3-204ENST00000436070 2592 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LPCAT4Q643R3 NAB1-203ENST00000409641 2472 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LPCAT4Q643R3 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
LPCAT4Q643R3 EGLN3-205ENST00000547327 2849 ntBASIC13.12□□□□□ -0.31
LPCAT4Q643R3 MB21D1-201ENST00000370315 3182 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LPCAT4Q643R3 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC13.12□□□□□ -0.31
LPCAT4Q643R3 P3H2-201ENST00000319332 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LPCAT4Q643R3 SLC8A3-205ENST00000394330 2622 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LPCAT4Q643R3 SLC4A2-204ENST00000461735 4387 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LPCAT4Q643R3 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LPCAT4Q643R3 ZNF555-203ENST00000591539 2270 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
LPCAT4Q643R3 DNMT3A-202ENST00000321117 4279 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
LPCAT4Q643R3 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
LPCAT4Q643R3 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LPCAT4Q643R3 DHX30-207ENST00000457607 3748 ntTSL 5 BASIC13.11□□□□□ -0.31
LPCAT4Q643R3 TXLNG-202ENST00000398155 3998 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
LPCAT4Q643R3 C12orf66-201ENST00000311915 2698 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LPCAT4Q643R3 SEMA4D-212ENST00000450295 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LPCAT4Q643R3 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LPCAT4Q643R3 ITGAX-201ENST00000268296 4703 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
LPCAT4Q643R3 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms