Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CDKAL1Q5VV42 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CDKAL1Q5VV42 FAM71E2-201ENST00000424985 3191 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CDKAL1Q5VV42 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDKAL1Q5VV42 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CDKAL1Q5VV42 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDKAL1Q5VV42 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDKAL1Q5VV42 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC15.15■□□□□ 0.02
CDKAL1Q5VV42 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDKAL1Q5VV42 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CDKAL1Q5VV42 TRIM40-207ENST00000396581 2086 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDKAL1Q5VV42 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDKAL1Q5VV42 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CDKAL1Q5VV42 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDKAL1Q5VV42 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CDKAL1Q5VV42 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC15.15■□□□□ 0.02
CDKAL1Q5VV42 ZSCAN32-203ENST00000396852 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDKAL1Q5VV42 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDKAL1Q5VV42 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC15.15■□□□□ 0.02
CDKAL1Q5VV42 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDKAL1Q5VV42 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDKAL1Q5VV42 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDKAL1Q5VV42 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDKAL1Q5VV42 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CDKAL1Q5VV42 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC15.15■□□□□ 0.02
CDKAL1Q5VV42 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDKAL1Q5VV42 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC15.15■□□□□ 0.02
CDKAL1Q5VV42 EEF1DP2-201ENST00000433698 843 ntBASIC15.15■□□□□ 0.02
CDKAL1Q5VV42 NKAIN1P1-201ENST00000435754 582 ntBASIC15.15■□□□□ 0.02
CDKAL1Q5VV42 C3orf35-206ENST00000452017 513 ntAPPRIS P5 TSL 5 BASIC15.15■□□□□ 0.02
CDKAL1Q5VV42 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDKAL1Q5VV42 KLHL24-211ENST00000476808 2126 ntTSL 2 BASIC15.15■□□□□ 0.02
CDKAL1Q5VV42 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDKAL1Q5VV42 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC15.15■□□□□ 0.02
CDKAL1Q5VV42 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
CDKAL1Q5VV42 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC15.15■□□□□ 0.02
CDKAL1Q5VV42 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDKAL1Q5VV42 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDKAL1Q5VV42 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC15.15■□□□□ 0.02
CDKAL1Q5VV42 AC008687.7-203ENST00000598442 551 ntTSL 4 BASIC15.15■□□□□ 0.02
CDKAL1Q5VV42 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC15.15■□□□□ 0.02
CDKAL1Q5VV42 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC15.15■□□□□ 0.02
CDKAL1Q5VV42 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC15.15■□□□□ 0.02
CDKAL1Q5VV42 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
CDKAL1Q5VV42 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC15.15■□□□□ 0.02
CDKAL1Q5VV42 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC15.15■□□□□ 0.02
CDKAL1Q5VV42 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CDKAL1Q5VV42 AC015909.3-201ENST00000572855 1794 ntBASIC15.15■□□□□ 0.02
CDKAL1Q5VV42 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC15.15■□□□□ 0.02
CDKAL1Q5VV42 ABR-205ENST00000544583 5595 ntTSL 2 BASIC15.15■□□□□ 0.02
CDKAL1Q5VV42 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC15.15■□□□□ 0.02
CDKAL1Q5VV42 DHRS7B-202ENST00000395511 2175 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDKAL1Q5VV42 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDKAL1Q5VV42 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDKAL1Q5VV42 EHMT2-203ENST00000375537 3965 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDKAL1Q5VV42 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDKAL1Q5VV42 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDKAL1Q5VV42 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDKAL1Q5VV42 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CDKAL1Q5VV42 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDKAL1Q5VV42 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CDKAL1Q5VV42 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CDKAL1Q5VV42 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDKAL1Q5VV42 EPS8L3-201ENST00000361852 2130 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDKAL1Q5VV42 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDKAL1Q5VV42 RASA4CP-203ENST00000446874 3193 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDKAL1Q5VV42 SRP54-201ENST00000216774 2279 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDKAL1Q5VV42 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDKAL1Q5VV42 PPP1R26P2-201ENST00000611403 3595 ntBASIC15.14■□□□□ 0.01
CDKAL1Q5VV42 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDKAL1Q5VV42 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDKAL1Q5VV42 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDKAL1Q5VV42 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC15.14■□□□□ 0.01
CDKAL1Q5VV42 USP2-AS1-202ENST00000500970 1784 ntTSL 2 BASIC15.14■□□□□ 0.01
CDKAL1Q5VV42 PPFIBP1-215ENST00000542629 3208 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDKAL1Q5VV42 TARS2-205ENST00000438568 2188 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDKAL1Q5VV42 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDKAL1Q5VV42 SLCO2A1-208ENST00000493729 1918 ntTSL 5 BASIC15.14■□□□□ 0.01
CDKAL1Q5VV42 ZBED2-201ENST00000317012 2311 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CDKAL1Q5VV42 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC15.14■□□□□ 0.01
CDKAL1Q5VV42 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDKAL1Q5VV42 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDKAL1Q5VV42 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC15.14■□□□□ 0.01
CDKAL1Q5VV42 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDKAL1Q5VV42 HNRNPA1P41-201ENST00000397777 928 ntBASIC15.14■□□□□ 0.01
CDKAL1Q5VV42 LINC00265-2P-201ENST00000413372 782 ntBASIC15.14■□□□□ 0.01
CDKAL1Q5VV42 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC15.14■□□□□ 0.01
CDKAL1Q5VV42 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC15.14■□□□□ 0.01
CDKAL1Q5VV42 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDKAL1Q5VV42 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC15.14■□□□□ 0.01
CDKAL1Q5VV42 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDKAL1Q5VV42 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC15.14■□□□□ 0.01
CDKAL1Q5VV42 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDKAL1Q5VV42 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDKAL1Q5VV42 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC15.14■□□□□ 0.01
CDKAL1Q5VV42 MIR6805-201ENST00000615055 62 ntBASIC15.14■□□□□ 0.01
CDKAL1Q5VV42 LINC00969-321ENST00000629990 806 ntTSL 5 BASIC15.14■□□□□ 0.01
CDKAL1Q5VV42 MRPS16-202ENST00000372945 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDKAL1Q5VV42 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDKAL1Q5VV42 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms