Protein–RNA interactions for Protein: Q00975

CACNA1B, Voltage-dependent N-type calcium channel subunit alpha-1B, humanhuman

Predictions only

Length 2,339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1BQ00975 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CACNA1BQ00975 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
CACNA1BQ00975 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CACNA1BQ00975 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CACNA1BQ00975 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CACNA1BQ00975 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC12.68□□□□□ -0.38
CACNA1BQ00975 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
CACNA1BQ00975 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CACNA1BQ00975 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CACNA1BQ00975 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CACNA1BQ00975 ASS1-201ENST00000352480 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CACNA1BQ00975 MRPL55-212ENST00000366739 641 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
CACNA1BQ00975 SH3BGR-202ENST00000380631 780 ntTSL 5 BASIC12.68□□□□□ -0.38
CACNA1BQ00975 U3.49-201ENST00000391065 214 ntBASIC12.68□□□□□ -0.38
CACNA1BQ00975 AC073472.1-201ENST00000441433 803 ntBASIC12.68□□□□□ -0.38
CACNA1BQ00975 RN7SL553P-201ENST00000482215 298 ntBASIC12.68□□□□□ -0.38
CACNA1BQ00975 AC097658.2-201ENST00000512715 624 ntTSL 3 BASIC12.68□□□□□ -0.38
CACNA1BQ00975 BLK-205ENST00000529894 2017 ntTSL 5 BASIC12.68□□□□□ -0.38
CACNA1BQ00975 EEF1DP8-201ENST00000534760 536 ntBASIC12.68□□□□□ -0.38
CACNA1BQ00975 DDX11L8-201ENST00000535849 366 ntBASIC12.68□□□□□ -0.38
CACNA1BQ00975 AC087190.3-201ENST00000562893 753 ntTSL 3 BASIC12.68□□□□□ -0.38
CACNA1BQ00975 AC245748.2-201ENST00000588655 574 ntTSL 4 BASIC12.68□□□□□ -0.38
CACNA1BQ00975 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CACNA1BQ00975 TNFRSF10A-204ENST00000613472 978 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CACNA1BQ00975 AL139035.1-202ENST00000626308 565 ntTSL 4 BASIC12.68□□□□□ -0.38
CACNA1BQ00975 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CACNA1BQ00975 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CACNA1BQ00975 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CACNA1BQ00975 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CACNA1BQ00975 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
CACNA1BQ00975 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CACNA1BQ00975 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CACNA1BQ00975 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
CACNA1BQ00975 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC12.68□□□□□ -0.38
CACNA1BQ00975 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
CACNA1BQ00975 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CACNA1BQ00975 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
CACNA1BQ00975 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
CACNA1BQ00975 MYCNOS-202ENST00000641263 1313 ntBASIC12.68□□□□□ -0.38
CACNA1BQ00975 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CACNA1BQ00975 LINC01658-201ENST00000320372 1578 ntTSL 2 BASIC12.67□□□□□ -0.38
CACNA1BQ00975 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CACNA1BQ00975 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC12.67□□□□□ -0.38
CACNA1BQ00975 ARMCX6-201ENST00000361910 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CACNA1BQ00975 WFDC2-201ENST00000217425 356 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CACNA1BQ00975 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC12.67□□□□□ -0.38
CACNA1BQ00975 IGLJ1-201ENST00000390320 127 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
CACNA1BQ00975 AC007557.2-201ENST00000440900 583 ntTSL 2 BASIC12.67□□□□□ -0.38
CACNA1BQ00975 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC12.67□□□□□ -0.38
CACNA1BQ00975 AL356479.1-202ENST00000456933 714 ntTSL 3 BASIC12.67□□□□□ -0.38
CACNA1BQ00975 AC104123.1-201ENST00000502645 473 ntTSL 5 BASIC12.67□□□□□ -0.38
CACNA1BQ00975 SSSCA1-203ENST00000526877 713 ntTSL 3 BASIC12.67□□□□□ -0.38
CACNA1BQ00975 RAB30-AS1-205ENST00000530270 1116 ntTSL 2 BASIC12.67□□□□□ -0.38
CACNA1BQ00975 MAX-218ENST00000557746 571 ntTSL 4 BASIC12.67□□□□□ -0.38
CACNA1BQ00975 AC025219.1-201ENST00000559299 526 ntTSL 4 BASIC12.67□□□□□ -0.38
CACNA1BQ00975 AC093802.2-201ENST00000567853 583 ntBASIC12.67□□□□□ -0.38
CACNA1BQ00975 MAP3K14-205ENST00000617331 1049 ntTSL 5 BASIC12.67□□□□□ -0.38
CACNA1BQ00975 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC12.67□□□□□ -0.38
CACNA1BQ00975 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
CACNA1BQ00975 LINC01763-201ENST00000425185 1547 ntTSL 3 BASIC12.67□□□□□ -0.38
CACNA1BQ00975 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CACNA1BQ00975 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
CACNA1BQ00975 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CACNA1BQ00975 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC12.67□□□□□ -0.38
CACNA1BQ00975 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CACNA1BQ00975 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CACNA1BQ00975 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CACNA1BQ00975 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CACNA1BQ00975 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CACNA1BQ00975 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CACNA1BQ00975 SPATA22-203ENST00000397168 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CACNA1BQ00975 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CACNA1BQ00975 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CACNA1BQ00975 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CACNA1BQ00975 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CACNA1BQ00975 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CACNA1BQ00975 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
CACNA1BQ00975 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CACNA1BQ00975 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CACNA1BQ00975 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CACNA1BQ00975 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CACNA1BQ00975 TIPRL-201ENST00000367830 727 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CACNA1BQ00975 AP001341.1-201ENST00000409758 763 ntTSL 3 BASIC12.67□□□□□ -0.38
CACNA1BQ00975 EEF1DP2-201ENST00000433698 843 ntBASIC12.67□□□□□ -0.38
CACNA1BQ00975 AL022725.1-201ENST00000436283 369 ntTSL 2 BASIC12.67□□□□□ -0.38
CACNA1BQ00975 IGFL1-201ENST00000437936 769 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CACNA1BQ00975 AF274858.2-201ENST00000446370 617 ntTSL 2 BASIC12.67□□□□□ -0.38
CACNA1BQ00975 E2F6P4-201ENST00000468625 514 ntBASIC12.67□□□□□ -0.38
CACNA1BQ00975 SLC25A5P6-201ENST00000515328 886 ntBASIC12.67□□□□□ -0.38
CACNA1BQ00975 AC090095.1-201ENST00000519275 871 ntBASIC12.67□□□□□ -0.38
CACNA1BQ00975 LRP4-AS1-202ENST00000531719 731 ntTSL 4 BASIC12.67□□□□□ -0.38
CACNA1BQ00975 AP000763.1-201ENST00000539481 325 ntBASIC12.67□□□□□ -0.38
CACNA1BQ00975 AC018845.3-201ENST00000562536 516 ntTSL 3 BASIC12.67□□□□□ -0.38
CACNA1BQ00975 RN7SL733P-201ENST00000582253 329 ntBASIC12.67□□□□□ -0.38
CACNA1BQ00975 RN7SL248P-201ENST00000615117 329 ntBASIC12.67□□□□□ -0.38
CACNA1BQ00975 RN7SL453P-201ENST00000620275 329 ntBASIC12.67□□□□□ -0.38
CACNA1BQ00975 AC023509.3-202ENST00000591834 1609 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
CACNA1BQ00975 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CACNA1BQ00975 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CACNA1BQ00975 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms