Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
IRX3P78415 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
IRX3P78415 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
IRX3P78415 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC16.28■□□□□ 0.2
IRX3P78415 GPI-205ENST00000586425 1799 ntTSL 5 BASIC16.28■□□□□ 0.2
IRX3P78415 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
IRX3P78415 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
IRX3P78415 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
IRX3P78415 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
IRX3P78415 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC16.28■□□□□ 0.2
IRX3P78415 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
IRX3P78415 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
IRX3P78415 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
IRX3P78415 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC16.27■□□□□ 0.2
IRX3P78415 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC16.27■□□□□ 0.2
IRX3P78415 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC16.27■□□□□ 0.2
IRX3P78415 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
IRX3P78415 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
IRX3P78415 PI4KAP2-211ENST00000486209 3213 ntTSL 5 BASIC16.27■□□□□ 0.2
IRX3P78415 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
IRX3P78415 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
IRX3P78415 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.2
IRX3P78415 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
IRX3P78415 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
IRX3P78415 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
IRX3P78415 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
IRX3P78415 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
IRX3P78415 RPL3P2-204ENST00000413027 1203 ntBASIC16.27■□□□□ 0.2
IRX3P78415 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC16.27■□□□□ 0.2
IRX3P78415 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
IRX3P78415 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC16.27■□□□□ 0.2
IRX3P78415 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC16.27■□□□□ 0.2
IRX3P78415 VENTXP4-201ENST00000449029 958 ntBASIC16.27■□□□□ 0.2
IRX3P78415 BPIFB5P-201ENST00000457066 1099 ntBASIC16.27■□□□□ 0.2
IRX3P78415 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC16.27■□□□□ 0.2
IRX3P78415 AC026470.1-201ENST00000478038 846 ntBASIC16.27■□□□□ 0.2
IRX3P78415 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC16.27■□□□□ 0.2
IRX3P78415 AC093300.1-201ENST00000510368 1201 ntBASIC16.27■□□□□ 0.2
IRX3P78415 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC16.27■□□□□ 0.2
IRX3P78415 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.2
IRX3P78415 AC006548.2-201ENST00000605217 529 ntBASIC16.27■□□□□ 0.2
IRX3P78415 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
IRX3P78415 PHB-210ENST00000511832 1509 ntTSL 2 BASIC16.27■□□□□ 0.2
IRX3P78415 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.2
IRX3P78415 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC16.27■□□□□ 0.2
IRX3P78415 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
IRX3P78415 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
IRX3P78415 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
IRX3P78415 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
IRX3P78415 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC16.27■□□□□ 0.19
IRX3P78415 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC16.27■□□□□ 0.19
IRX3P78415 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC16.27■□□□□ 0.19
IRX3P78415 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
IRX3P78415 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
IRX3P78415 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
IRX3P78415 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
IRX3P78415 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
IRX3P78415 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC16.27■□□□□ 0.19
IRX3P78415 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
IRX3P78415 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC16.27■□□□□ 0.19
IRX3P78415 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC16.27■□□□□ 0.19
IRX3P78415 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
IRX3P78415 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
IRX3P78415 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
IRX3P78415 AL365181.1-201ENST00000564032 1828 ntBASIC16.26■□□□□ 0.19
IRX3P78415 GSN-209ENST00000449733 2702 ntTSL 2 BASIC16.26■□□□□ 0.19
IRX3P78415 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
IRX3P78415 MVP-202ENST00000395353 2925 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
IRX3P78415 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
IRX3P78415 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
IRX3P78415 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
IRX3P78415 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC16.26■□□□□ 0.19
IRX3P78415 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
IRX3P78415 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
IRX3P78415 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC16.26■□□□□ 0.19
IRX3P78415 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
IRX3P78415 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC16.26■□□□□ 0.19
IRX3P78415 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
IRX3P78415 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
IRX3P78415 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC16.26■□□□□ 0.19
IRX3P78415 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
IRX3P78415 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
IRX3P78415 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
IRX3P78415 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
IRX3P78415 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
IRX3P78415 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
IRX3P78415 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC16.26■□□□□ 0.19
IRX3P78415 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC16.26■□□□□ 0.19
IRX3P78415 OR2W2P-201ENST00000406313 909 ntBASIC16.26■□□□□ 0.19
IRX3P78415 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC16.26■□□□□ 0.19
IRX3P78415 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC16.26■□□□□ 0.19
IRX3P78415 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC16.26■□□□□ 0.19
IRX3P78415 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC16.26■□□□□ 0.19
IRX3P78415 STK24P1-201ENST00000455035 1291 ntBASIC16.26■□□□□ 0.19
IRX3P78415 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
IRX3P78415 AC025186.1-201ENST00000478174 870 ntBASIC16.26■□□□□ 0.19
IRX3P78415 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC16.26■□□□□ 0.19
IRX3P78415 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
IRX3P78415 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC16.26■□□□□ 0.19
IRX3P78415 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms