Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
CDK7P50613 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDK7P50613 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDK7P50613 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDK7P50613 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDK7P50613 AC113367.3-201ENST00000508316 1912 ntBASIC15.27■□□□□ 0.03
CDK7P50613 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDK7P50613 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.03
CDK7P50613 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC15.27■□□□□ 0.03
CDK7P50613 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDK7P50613 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDK7P50613 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDK7P50613 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDK7P50613 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
CDK7P50613 Z98885.3-201ENST00000624882 1757 ntBASIC15.26■□□□□ 0.03
CDK7P50613 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDK7P50613 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDK7P50613 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CDK7P50613 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDK7P50613 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CDK7P50613 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDK7P50613 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.26■□□□□ 0.03
CDK7P50613 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDK7P50613 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CDK7P50613 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
CDK7P50613 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDK7P50613 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDK7P50613 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDK7P50613 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDK7P50613 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDK7P50613 AL359649.1-202ENST00000375713 443 ntTSL 5 BASIC15.26■□□□□ 0.03
CDK7P50613 AL158207.2-201ENST00000414926 266 ntTSL 5 BASIC15.26■□□□□ 0.03
CDK7P50613 AP001615.1-201ENST00000423276 461 ntTSL 3 BASIC15.26■□□□□ 0.03
CDK7P50613 AC005722.1-201ENST00000431878 964 ntBASIC15.26■□□□□ 0.03
CDK7P50613 AC079250.1-201ENST00000456046 531 ntBASIC15.26■□□□□ 0.03
CDK7P50613 URB1-AS1-201ENST00000534991 831 ntBASIC15.26■□□□□ 0.03
CDK7P50613 IFI27L1-212ENST00000557218 413 ntTSL 3 BASIC15.26■□□□□ 0.03
CDK7P50613 AC019294.2-203ENST00000569596 594 ntTSL 3 BASIC15.26■□□□□ 0.03
CDK7P50613 HAMP-203ENST00000598398 652 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CDK7P50613 AC110057.1-201ENST00000636031 898 ntBASIC15.26■□□□□ 0.03
CDK7P50613 PAX6-237ENST00000638696 1203 ntTSL 5 BASIC15.26■□□□□ 0.03
CDK7P50613 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDK7P50613 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDK7P50613 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CDK7P50613 HTD2-205ENST00000477305 1531 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CDK7P50613 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDK7P50613 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDK7P50613 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDK7P50613 ATP6V1C1-205ENST00000521514 1484 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDK7P50613 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDK7P50613 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDK7P50613 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
CDK7P50613 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDK7P50613 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDK7P50613 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDK7P50613 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDK7P50613 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
CDK7P50613 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDK7P50613 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CDK7P50613 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC15.25■□□□□ 0.03
CDK7P50613 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDK7P50613 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDK7P50613 AIG1-203ENST00000367596 559 ntTSL 2 BASIC15.25■□□□□ 0.03
CDK7P50613 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
CDK7P50613 PLA2G2A-202ENST00000400520 974 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDK7P50613 OR7E155P-201ENST00000412208 1014 ntBASIC15.25■□□□□ 0.03
CDK7P50613 PHBP10-201ENST00000416467 784 ntBASIC15.25■□□□□ 0.03
CDK7P50613 RPL18AP16-201ENST00000424057 531 ntBASIC15.25■□□□□ 0.03
CDK7P50613 AC041040.1-201ENST00000425197 460 ntBASIC15.25■□□□□ 0.03
CDK7P50613 AC010086.2-201ENST00000428616 226 ntBASIC15.25■□□□□ 0.03
CDK7P50613 CCND3P1-201ENST00000438347 580 ntBASIC15.25■□□□□ 0.03
CDK7P50613 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC15.25■□□□□ 0.03
CDK7P50613 AC104212.2-201ENST00000478813 628 ntBASIC15.25■□□□□ 0.03
CDK7P50613 CD44-224ENST00000526669 870 ntTSL 5 BASIC15.25■□□□□ 0.03
CDK7P50613 ACY3-202ENST00000529256 933 ntTSL 3 BASIC15.25■□□□□ 0.03
CDK7P50613 APOPT1-215ENST00000556253 783 ntTSL 3 BASIC15.25■□□□□ 0.03
CDK7P50613 AC016582.2-202ENST00000587765 1094 ntBASIC15.25■□□□□ 0.03
CDK7P50613 AC005786.2-201ENST00000592368 369 ntTSL 3 BASIC15.25■□□□□ 0.03
CDK7P50613 AC023090.1-201ENST00000592906 502 ntTSL 3 BASIC15.25■□□□□ 0.03
CDK7P50613 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDK7P50613 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
CDK7P50613 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC15.25■□□□□ 0.03
CDK7P50613 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDK7P50613 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC15.25■□□□□ 0.03
CDK7P50613 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.25■□□□□ 0.03
CDK7P50613 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC15.25■□□□□ 0.03
CDK7P50613 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDK7P50613 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
CDK7P50613 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC15.25■□□□□ 0.03
CDK7P50613 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
CDK7P50613 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.25■□□□□ 0.03
CDK7P50613 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDK7P50613 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDK7P50613 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
CDK7P50613 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.24■□□□□ 0.03
CDK7P50613 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDK7P50613 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDK7P50613 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDK7P50613 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDK7P50613 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms