Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
COL8A2P25067 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
COL8A2P25067 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
COL8A2P25067 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
COL8A2P25067 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
COL8A2P25067 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
COL8A2P25067 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
COL8A2P25067 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC11.77□□□□□ -0.53
COL8A2P25067 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC11.77□□□□□ -0.53
COL8A2P25067 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC11.77□□□□□ -0.53
COL8A2P25067 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC11.77□□□□□ -0.53
COL8A2P25067 PARP8-206ENST00000503665 572 ntTSL 4 BASIC11.77□□□□□ -0.53
COL8A2P25067 CTBP2P4-201ENST00000513884 920 ntBASIC11.77□□□□□ -0.53
COL8A2P25067 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC11.77□□□□□ -0.53
COL8A2P25067 RN7SKP155-201ENST00000516031 288 ntBASIC11.77□□□□□ -0.53
COL8A2P25067 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC11.77□□□□□ -0.53
COL8A2P25067 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC11.77□□□□□ -0.53
COL8A2P25067 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC11.77□□□□□ -0.53
COL8A2P25067 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC11.77□□□□□ -0.53
COL8A2P25067 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC11.77□□□□□ -0.53
COL8A2P25067 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC11.77□□□□□ -0.53
COL8A2P25067 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC11.77□□□□□ -0.53
COL8A2P25067 AL009176.1-201ENST00000607876 650 ntBASIC11.77□□□□□ -0.53
COL8A2P25067 ST5-261ENST00000626808 1071 ntTSL 5 BASIC11.77□□□□□ -0.53
COL8A2P25067 HELLS-212ENST00000630929 400 ntTSL 5 BASIC11.77□□□□□ -0.53
COL8A2P25067 AL365181.3-201ENST00000605886 3222 ntBASIC11.77□□□□□ -0.53
COL8A2P25067 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
COL8A2P25067 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
COL8A2P25067 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
COL8A2P25067 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
COL8A2P25067 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
COL8A2P25067 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
COL8A2P25067 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC11.77□□□□□ -0.53
COL8A2P25067 AC025271.4-201ENST00000621477 1726 ntBASIC11.77□□□□□ -0.53
COL8A2P25067 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
COL8A2P25067 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
COL8A2P25067 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
COL8A2P25067 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
COL8A2P25067 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
COL8A2P25067 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
COL8A2P25067 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
COL8A2P25067 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
COL8A2P25067 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
COL8A2P25067 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
COL8A2P25067 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
COL8A2P25067 DDC-213ENST00000617822 1809 ntTSL 3 BASIC11.76□□□□□ -0.53
COL8A2P25067 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC11.76□□□□□ -0.53
COL8A2P25067 RCC2P1-201ENST00000452257 1476 ntBASIC11.76□□□□□ -0.53
COL8A2P25067 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC11.76□□□□□ -0.53
COL8A2P25067 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
COL8A2P25067 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
COL8A2P25067 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
COL8A2P25067 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC11.76□□□□□ -0.53
COL8A2P25067 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC11.76□□□□□ -0.53
COL8A2P25067 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
COL8A2P25067 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
COL8A2P25067 C8orf49-201ENST00000525043 1968 ntBASIC11.76□□□□□ -0.53
COL8A2P25067 AC027612.1-201ENST00000445234 2395 ntBASIC11.76□□□□□ -0.53
COL8A2P25067 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
COL8A2P25067 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
COL8A2P25067 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC11.76□□□□□ -0.53
COL8A2P25067 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
COL8A2P25067 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC11.76□□□□□ -0.53
COL8A2P25067 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC11.76□□□□□ -0.53
COL8A2P25067 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
COL8A2P25067 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
COL8A2P25067 BAK1P1-201ENST00000317045 636 ntBASIC11.76□□□□□ -0.53
COL8A2P25067 RNVU1-8-201ENST00000364272 125 ntBASIC11.76□□□□□ -0.53
COL8A2P25067 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
COL8A2P25067 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
COL8A2P25067 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
COL8A2P25067 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
COL8A2P25067 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
COL8A2P25067 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC11.76□□□□□ -0.53
COL8A2P25067 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
COL8A2P25067 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
COL8A2P25067 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC11.76□□□□□ -0.53
COL8A2P25067 CD81-209ENST00000492627 886 ntTSL 3 BASIC11.76□□□□□ -0.53
COL8A2P25067 PRSS3P1-201ENST00000503996 742 ntBASIC11.76□□□□□ -0.53
COL8A2P25067 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC11.76□□□□□ -0.53
COL8A2P25067 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC11.76□□□□□ -0.53
COL8A2P25067 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC11.76□□□□□ -0.53
COL8A2P25067 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC11.76□□□□□ -0.53
COL8A2P25067 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC11.76□□□□□ -0.53
COL8A2P25067 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC11.76□□□□□ -0.53
COL8A2P25067 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC11.76□□□□□ -0.53
COL8A2P25067 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
COL8A2P25067 AL031673.1-201ENST00000611460 466 ntBASIC11.76□□□□□ -0.53
COL8A2P25067 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC11.76□□□□□ -0.53
COL8A2P25067 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
COL8A2P25067 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC11.76□□□□□ -0.53
COL8A2P25067 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
COL8A2P25067 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC11.76□□□□□ -0.53
COL8A2P25067 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
COL8A2P25067 GOLGA8UP-201ENST00000527159 1755 ntBASIC11.76□□□□□ -0.53
COL8A2P25067 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
COL8A2P25067 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC11.76□□□□□ -0.53
COL8A2P25067 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
COL8A2P25067 AC015909.5-201ENST00000624336 2266 ntBASIC11.76□□□□□ -0.53
COL8A2P25067 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms