Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 AAR2-203ENST00000397286 1466 ntTSL 5 BASIC12.46□□□□□ -0.41
ZIC3O60481 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
ZIC3O60481 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ZIC3O60481 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ZIC3O60481 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.41
ZIC3O60481 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ZIC3O60481 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
ZIC3O60481 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
ZIC3O60481 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC12.46□□□□□ -0.41
ZIC3O60481 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ZIC3O60481 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
ZIC3O60481 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
ZIC3O60481 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ZIC3O60481 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC12.46□□□□□ -0.41
ZIC3O60481 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
ZIC3O60481 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ZIC3O60481 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
ZIC3O60481 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ZIC3O60481 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ZIC3O60481 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
ZIC3O60481 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ZIC3O60481 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
ZIC3O60481 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
ZIC3O60481 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
ZIC3O60481 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
ZIC3O60481 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC12.46□□□□□ -0.41
ZIC3O60481 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC12.46□□□□□ -0.41
ZIC3O60481 RN7SL23P-201ENST00000484055 275 ntBASIC12.46□□□□□ -0.41
ZIC3O60481 RN7SL556P-201ENST00000582856 298 ntBASIC12.46□□□□□ -0.41
ZIC3O60481 NAT9-224ENST00000583757 583 ntTSL 3 BASIC12.46□□□□□ -0.41
ZIC3O60481 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC12.46□□□□□ -0.41
ZIC3O60481 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC12.46□□□□□ -0.41
ZIC3O60481 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC12.46□□□□□ -0.41
ZIC3O60481 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ZIC3O60481 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
ZIC3O60481 MANEA-AS1-201ENST00000564541 2268 ntBASIC12.46□□□□□ -0.42
ZIC3O60481 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
ZIC3O60481 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
ZIC3O60481 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
ZIC3O60481 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
ZIC3O60481 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
ZIC3O60481 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
ZIC3O60481 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
ZIC3O60481 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
ZIC3O60481 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
ZIC3O60481 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC12.46□□□□□ -0.42
ZIC3O60481 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
ZIC3O60481 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
ZIC3O60481 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.42
ZIC3O60481 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.42
ZIC3O60481 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC12.46□□□□□ -0.42
ZIC3O60481 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ZIC3O60481 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
ZIC3O60481 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
ZIC3O60481 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ZIC3O60481 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC12.45□□□□□ -0.42
ZIC3O60481 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
ZIC3O60481 SETMAR-205ENST00000425863 1657 ntTSL 2 BASIC12.45□□□□□ -0.42
ZIC3O60481 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ZIC3O60481 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ZIC3O60481 STK25-235ENST00000543554 2556 ntTSL 2 BASIC12.45□□□□□ -0.42
ZIC3O60481 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ZIC3O60481 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC12.45□□□□□ -0.42
ZIC3O60481 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
ZIC3O60481 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ZIC3O60481 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC12.45□□□□□ -0.42
ZIC3O60481 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ZIC3O60481 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ZIC3O60481 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ZIC3O60481 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC12.45□□□□□ -0.42
ZIC3O60481 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ZIC3O60481 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ZIC3O60481 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ZIC3O60481 IGF1-203ENST00000392904 761 ntTSL 5 BASIC12.45□□□□□ -0.42
ZIC3O60481 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ZIC3O60481 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
ZIC3O60481 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC12.45□□□□□ -0.42
ZIC3O60481 ACTBP14-201ENST00000411655 1089 ntBASIC12.45□□□□□ -0.42
ZIC3O60481 ACTG1P19-201ENST00000418987 1116 ntBASIC12.45□□□□□ -0.42
ZIC3O60481 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
ZIC3O60481 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ZIC3O60481 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ZIC3O60481 AC005077.3-201ENST00000449614 213 ntBASIC12.45□□□□□ -0.42
ZIC3O60481 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC12.45□□□□□ -0.42
ZIC3O60481 BUD31-205ENST00000456893 512 ntTSL 5 BASIC12.45□□□□□ -0.42
ZIC3O60481 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC12.45□□□□□ -0.42
ZIC3O60481 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
ZIC3O60481 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC12.45□□□□□ -0.42
ZIC3O60481 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
ZIC3O60481 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
ZIC3O60481 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC12.45□□□□□ -0.42
ZIC3O60481 GMFG-209ENST00000600322 622 ntTSL 5 BASIC12.45□□□□□ -0.42
ZIC3O60481 AP003419.4-201ENST00000616071 517 ntBASIC12.45□□□□□ -0.42
ZIC3O60481 MIR7845-201ENST00000618396 99 ntBASIC12.45□□□□□ -0.42
ZIC3O60481 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC12.45□□□□□ -0.42
ZIC3O60481 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC12.45□□□□□ -0.42
ZIC3O60481 AGAP12P-201ENST00000585227 2359 ntBASIC12.45□□□□□ -0.42
ZIC3O60481 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ZIC3O60481 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC12.45□□□□□ -0.42
ZIC3O60481 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms