Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC9.21□□□□□ -0.93
LINC00474Q9P2X8 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
LINC00474Q9P2X8 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
LINC00474Q9P2X8 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC9.21□□□□□ -0.93
LINC00474Q9P2X8 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC9.21□□□□□ -0.93
LINC00474Q9P2X8 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.93
LINC00474Q9P2X8 C10orf90-202ENST00000356858 2995 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.93
LINC00474Q9P2X8 FAM102A-202ENST00000373084 3352 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
LINC00474Q9P2X8 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC9.21□□□□□ -0.93
LINC00474Q9P2X8 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
LINC00474Q9P2X8 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC9.21□□□□□ -0.93
LINC00474Q9P2X8 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC9.21□□□□□ -0.93
LINC00474Q9P2X8 AP002360.1-203ENST00000321844 5363 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.93
LINC00474Q9P2X8 NUMA1-205ENST00000393695 7343 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.93
LINC00474Q9P2X8 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.93
LINC00474Q9P2X8 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC9.21□□□□□ -0.93
LINC00474Q9P2X8 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC9.21□□□□□ -0.93
LINC00474Q9P2X8 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC9.21□□□□□ -0.93
LINC00474Q9P2X8 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.93
LINC00474Q9P2X8 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
LINC00474Q9P2X8 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
LINC00474Q9P2X8 TPX2-202ENST00000340513 3605 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
LINC00474Q9P2X8 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC9.21□□□□□ -0.93
LINC00474Q9P2X8 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
LINC00474Q9P2X8 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
LINC00474Q9P2X8 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
LINC00474Q9P2X8 AC011498.7-201ENST00000624986 2027 ntBASIC9.21□□□□□ -0.93
LINC00474Q9P2X8 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
LINC00474Q9P2X8 HDAC7-203ENST00000380610 3261 ntAPPRIS ALT2 TSL 2 BASIC9.21□□□□□ -0.93
LINC00474Q9P2X8 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC9.21□□□□□ -0.93
LINC00474Q9P2X8 AP001267.2-201ENST00000532619 2086 ntBASIC9.21□□□□□ -0.93
LINC00474Q9P2X8 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
LINC00474Q9P2X8 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
LINC00474Q9P2X8 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
LINC00474Q9P2X8 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC9.21□□□□□ -0.94
LINC00474Q9P2X8 RN7SKP214-201ENST00000364208 315 ntBASIC9.21□□□□□ -0.94
LINC00474Q9P2X8 DPM3-202ENST00000368399 517 ntBASIC9.21□□□□□ -0.94
LINC00474Q9P2X8 AGER-203ENST00000375065 665 ntTSL 2 BASIC9.21□□□□□ -0.94
LINC00474Q9P2X8 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC9.21□□□□□ -0.94
LINC00474Q9P2X8 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC9.21□□□□□ -0.94
LINC00474Q9P2X8 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
LINC00474Q9P2X8 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC9.21□□□□□ -0.94
LINC00474Q9P2X8 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
LINC00474Q9P2X8 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC9.21□□□□□ -0.94
LINC00474Q9P2X8 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC9.21□□□□□ -0.94
LINC00474Q9P2X8 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
LINC00474Q9P2X8 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC9.21□□□□□ -0.94
LINC00474Q9P2X8 EIF4HP1-201ENST00000453115 687 ntBASIC9.21□□□□□ -0.94
LINC00474Q9P2X8 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC9.21□□□□□ -0.94
LINC00474Q9P2X8 AC092658.1-201ENST00000505836 891 ntBASIC9.21□□□□□ -0.94
LINC00474Q9P2X8 SCARNA21-201ENST00000517026 139 ntBASIC9.21□□□□□ -0.94
LINC00474Q9P2X8 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC9.21□□□□□ -0.94
LINC00474Q9P2X8 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC9.21□□□□□ -0.94
LINC00474Q9P2X8 AC090857.1-201ENST00000527400 390 ntBASIC9.21□□□□□ -0.94
LINC00474Q9P2X8 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC9.21□□□□□ -0.94
LINC00474Q9P2X8 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
LINC00474Q9P2X8 AC009779.1-201ENST00000551138 283 ntBASIC9.21□□□□□ -0.94
LINC00474Q9P2X8 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC9.21□□□□□ -0.94
LINC00474Q9P2X8 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC9.21□□□□□ -0.94
LINC00474Q9P2X8 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
LINC00474Q9P2X8 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
LINC00474Q9P2X8 KRT18P8-201ENST00000581937 1246 ntBASIC9.21□□□□□ -0.94
LINC00474Q9P2X8 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC9.21□□□□□ -0.94
LINC00474Q9P2X8 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC9.21□□□□□ -0.94
LINC00474Q9P2X8 AC243960.2-201ENST00000600996 747 ntBASIC9.21□□□□□ -0.94
LINC00474Q9P2X8 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC9.21□□□□□ -0.94
LINC00474Q9P2X8 AC022748.3-201ENST00000621828 275 ntBASIC9.21□□□□□ -0.94
LINC00474Q9P2X8 ABBA01031663.1-201ENST00000635630 790 ntBASIC9.21□□□□□ -0.94
LINC00474Q9P2X8 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC9.21□□□□□ -0.94
LINC00474Q9P2X8 GALNT7-201ENST00000265000 4307 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
LINC00474Q9P2X8 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC9.21□□□□□ -0.94
LINC00474Q9P2X8 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC9.21□□□□□ -0.94
LINC00474Q9P2X8 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
LINC00474Q9P2X8 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
LINC00474Q9P2X8 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
LINC00474Q9P2X8 FAM90A7P-201ENST00000382628 1395 ntBASIC9.21□□□□□ -0.94
LINC00474Q9P2X8 FAM90A23P-201ENST00000400136 1395 ntBASIC9.21□□□□□ -0.94
LINC00474Q9P2X8 UAP1L1-201ENST00000360271 3201 ntTSL 2 BASIC9.21□□□□□ -0.94
LINC00474Q9P2X8 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC9.21□□□□□ -0.94
LINC00474Q9P2X8 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
LINC00474Q9P2X8 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC9.21□□□□□ -0.94
LINC00474Q9P2X8 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC9.21□□□□□ -0.94
LINC00474Q9P2X8 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC9.21□□□□□ -0.94
LINC00474Q9P2X8 USP20-202ENST00000358355 4371 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
LINC00474Q9P2X8 CMIP-202ENST00000537098 4357 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
LINC00474Q9P2X8 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC9.21□□□□□ -0.94
LINC00474Q9P2X8 ABCA3-202ENST00000382381 6446 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
LINC00474Q9P2X8 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
LINC00474Q9P2X8 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
LINC00474Q9P2X8 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC9.21□□□□□ -0.94
LINC00474Q9P2X8 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC9.21□□□□□ -0.94
LINC00474Q9P2X8 OCA2-201ENST00000353809 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
LINC00474Q9P2X8 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
LINC00474Q9P2X8 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC9.2□□□□□ -0.94
LINC00474Q9P2X8 FREM3-201ENST00000329798 6729 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
LINC00474Q9P2X8 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
LINC00474Q9P2X8 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
LINC00474Q9P2X8 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC9.2□□□□□ -0.94
LINC00474Q9P2X8 DLL1-201ENST00000366756 3174 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
LINC00474Q9P2X8 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms