Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC14.24□□□□□ -0.13
CFAP61Q8NHU2 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CFAP61Q8NHU2 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC14.24□□□□□ -0.13
CFAP61Q8NHU2 AL118558.3-201ENST00000607414 1079 ntBASIC14.24□□□□□ -0.13
CFAP61Q8NHU2 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
CFAP61Q8NHU2 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC14.24□□□□□ -0.13
CFAP61Q8NHU2 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CFAP61Q8NHU2 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC14.24□□□□□ -0.13
CFAP61Q8NHU2 AC134407.3-201ENST00000624035 2139 ntBASIC14.24□□□□□ -0.13
CFAP61Q8NHU2 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CFAP61Q8NHU2 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
CFAP61Q8NHU2 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC14.24□□□□□ -0.13
CFAP61Q8NHU2 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CFAP61Q8NHU2 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC14.24□□□□□ -0.13
CFAP61Q8NHU2 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CFAP61Q8NHU2 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CFAP61Q8NHU2 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC14.24□□□□□ -0.13
CFAP61Q8NHU2 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CFAP61Q8NHU2 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC14.24□□□□□ -0.13
CFAP61Q8NHU2 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CFAP61Q8NHU2 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
CFAP61Q8NHU2 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CFAP61Q8NHU2 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC14.24□□□□□ -0.13
CFAP61Q8NHU2 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
CFAP61Q8NHU2 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC14.23□□□□□ -0.13
CFAP61Q8NHU2 KIF3A-208ENST00000618515 3333 ntTSL 5 BASIC14.23□□□□□ -0.13
CFAP61Q8NHU2 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
CFAP61Q8NHU2 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CFAP61Q8NHU2 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CFAP61Q8NHU2 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CFAP61Q8NHU2 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CFAP61Q8NHU2 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CFAP61Q8NHU2 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CFAP61Q8NHU2 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CFAP61Q8NHU2 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CFAP61Q8NHU2 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC14.23□□□□□ -0.13
CFAP61Q8NHU2 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CFAP61Q8NHU2 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CFAP61Q8NHU2 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CFAP61Q8NHU2 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CFAP61Q8NHU2 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CFAP61Q8NHU2 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CFAP61Q8NHU2 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CFAP61Q8NHU2 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CFAP61Q8NHU2 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC14.23□□□□□ -0.13
CFAP61Q8NHU2 F2-205ENST00000530231 1849 ntTSL 5 BASIC14.23□□□□□ -0.13
CFAP61Q8NHU2 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CFAP61Q8NHU2 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CFAP61Q8NHU2 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CFAP61Q8NHU2 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CFAP61Q8NHU2 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC14.23□□□□□ -0.13
CFAP61Q8NHU2 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC14.23□□□□□ -0.13
CFAP61Q8NHU2 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CFAP61Q8NHU2 PTPA-218ENST00000435132 618 ntTSL 2 BASIC14.23□□□□□ -0.13
CFAP61Q8NHU2 ACTBP11-201ENST00000436287 1126 ntBASIC14.23□□□□□ -0.13
CFAP61Q8NHU2 POM121L10P-201ENST00000436994 1285 ntBASIC14.23□□□□□ -0.13
CFAP61Q8NHU2 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC14.23□□□□□ -0.13
CFAP61Q8NHU2 TUBB8P8-201ENST00000458717 1058 ntBASIC14.23□□□□□ -0.13
CFAP61Q8NHU2 AC108725.1-201ENST00000495472 409 ntBASIC14.23□□□□□ -0.13
CFAP61Q8NHU2 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CFAP61Q8NHU2 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CFAP61Q8NHU2 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC14.23□□□□□ -0.13
CFAP61Q8NHU2 LAMTOR5-AS1-209ENST00000597455 805 ntBASIC14.23□□□□□ -0.13
CFAP61Q8NHU2 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
CFAP61Q8NHU2 AL023803.2-201ENST00000620080 638 ntBASIC14.23□□□□□ -0.13
CFAP61Q8NHU2 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CFAP61Q8NHU2 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC14.23□□□□□ -0.13
CFAP61Q8NHU2 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
CFAP61Q8NHU2 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CFAP61Q8NHU2 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC14.23□□□□□ -0.13
CFAP61Q8NHU2 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CFAP61Q8NHU2 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CFAP61Q8NHU2 AC004899.1-201ENST00000424687 1714 ntBASIC14.23□□□□□ -0.13
CFAP61Q8NHU2 HPD-204ENST00000543163 1709 ntTSL 5 BASIC14.23□□□□□ -0.13
CFAP61Q8NHU2 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC14.23□□□□□ -0.13
CFAP61Q8NHU2 PIK3R5-220ENST00000623421 4318 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CFAP61Q8NHU2 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
CFAP61Q8NHU2 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
CFAP61Q8NHU2 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
CFAP61Q8NHU2 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC14.23□□□□□ -0.13
CFAP61Q8NHU2 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
CFAP61Q8NHU2 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CFAP61Q8NHU2 LINC02486-201ENST00000604157 3000 ntBASIC14.23□□□□□ -0.13
CFAP61Q8NHU2 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CFAP61Q8NHU2 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
CFAP61Q8NHU2 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
CFAP61Q8NHU2 CELF2-216ENST00000637215 2724 ntTSL 5 BASIC14.22□□□□□ -0.13
CFAP61Q8NHU2 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC14.22□□□□□ -0.13
CFAP61Q8NHU2 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
CFAP61Q8NHU2 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC14.22□□□□□ -0.13
CFAP61Q8NHU2 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
CFAP61Q8NHU2 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CFAP61Q8NHU2 CICP1-201ENST00000416803 2410 ntBASIC14.22□□□□□ -0.13
CFAP61Q8NHU2 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CFAP61Q8NHU2 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CFAP61Q8NHU2 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CFAP61Q8NHU2 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CFAP61Q8NHU2 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CFAP61Q8NHU2 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CFAP61Q8NHU2 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms