Protein–RNA interactions for Protein: Q86US8

SMG6, Telomerase-binding protein EST1A, humanhuman

Known RBP Predictions only

Length 1,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6Q86US8 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC18.84■□□□□ 0.61
SMG6Q86US8 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
SMG6Q86US8 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC18.84■□□□□ 0.61
SMG6Q86US8 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMG6Q86US8 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
SMG6Q86US8 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMG6Q86US8 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMG6Q86US8 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SMG6Q86US8 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC18.84■□□□□ 0.61
SMG6Q86US8 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SMG6Q86US8 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMG6Q86US8 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
SMG6Q86US8 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC18.84■□□□□ 0.61
SMG6Q86US8 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC18.83■□□□□ 0.61
SMG6Q86US8 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SMG6Q86US8 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SMG6Q86US8 AC108734.2-201ENST00000420887 1069 ntBASIC18.83■□□□□ 0.61
SMG6Q86US8 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC18.83■□□□□ 0.61
SMG6Q86US8 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC18.83■□□□□ 0.61
SMG6Q86US8 AC006529.1-201ENST00000459978 637 ntBASIC18.83■□□□□ 0.61
SMG6Q86US8 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC18.83■□□□□ 0.61
SMG6Q86US8 NSD1-211ENST00000511258 809 ntTSL 3 BASIC18.83■□□□□ 0.61
SMG6Q86US8 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC18.83■□□□□ 0.61
SMG6Q86US8 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC18.83■□□□□ 0.61
SMG6Q86US8 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC18.83■□□□□ 0.61
SMG6Q86US8 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
SMG6Q86US8 AC006158.1-201ENST00000610661 249 ntBASIC18.83■□□□□ 0.61
SMG6Q86US8 HELLS-212ENST00000630929 400 ntTSL 5 BASIC18.83■□□□□ 0.61
SMG6Q86US8 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC18.83■□□□□ 0.61
SMG6Q86US8 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SMG6Q86US8 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
SMG6Q86US8 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC18.83■□□□□ 0.6
SMG6Q86US8 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
SMG6Q86US8 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SMG6Q86US8 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SMG6Q86US8 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SMG6Q86US8 AC138761.6-201ENST00000583997 1423 ntBASIC18.83■□□□□ 0.6
SMG6Q86US8 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SMG6Q86US8 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC18.83■□□□□ 0.6
SMG6Q86US8 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SMG6Q86US8 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
SMG6Q86US8 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SMG6Q86US8 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
SMG6Q86US8 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC18.83■□□□□ 0.6
SMG6Q86US8 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SMG6Q86US8 AC019294.4-201ENST00000561777 2905 ntBASIC18.83■□□□□ 0.6
SMG6Q86US8 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SMG6Q86US8 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SMG6Q86US8 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SMG6Q86US8 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
SMG6Q86US8 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SMG6Q86US8 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
SMG6Q86US8 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
SMG6Q86US8 OR52M2P-201ENST00000414298 959 ntBASIC18.83■□□□□ 0.6
SMG6Q86US8 AL139008.1-201ENST00000437894 228 ntBASIC18.83■□□□□ 0.6
SMG6Q86US8 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SMG6Q86US8 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC18.83■□□□□ 0.6
SMG6Q86US8 CD81-209ENST00000492627 886 ntTSL 3 BASIC18.83■□□□□ 0.6
SMG6Q86US8 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC18.83■□□□□ 0.6
SMG6Q86US8 OR2A1-AS1-210ENST00000496968 531 ntBASIC18.83■□□□□ 0.6
SMG6Q86US8 AC093826.1-201ENST00000508655 993 ntBASIC18.83■□□□□ 0.6
SMG6Q86US8 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC18.83■□□□□ 0.6
SMG6Q86US8 AL022344.2-201ENST00000568976 968 ntBASIC18.83■□□□□ 0.6
SMG6Q86US8 AL049840.2-201ENST00000602722 535 ntBASIC18.83■□□□□ 0.6
SMG6Q86US8 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SMG6Q86US8 MSANTD2P1-201ENST00000445341 1368 ntBASIC18.83■□□□□ 0.6
SMG6Q86US8 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC18.82■□□□□ 0.6
SMG6Q86US8 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
SMG6Q86US8 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMG6Q86US8 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMG6Q86US8 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
SMG6Q86US8 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC18.82■□□□□ 0.6
SMG6Q86US8 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMG6Q86US8 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMG6Q86US8 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC18.82■□□□□ 0.6
SMG6Q86US8 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMG6Q86US8 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC18.82■□□□□ 0.6
SMG6Q86US8 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMG6Q86US8 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMG6Q86US8 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMG6Q86US8 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SMG6Q86US8 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
SMG6Q86US8 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SMG6Q86US8 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SMG6Q86US8 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
SMG6Q86US8 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC18.82■□□□□ 0.6
SMG6Q86US8 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
SMG6Q86US8 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMG6Q86US8 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
SMG6Q86US8 AC073210.1-201ENST00000414799 232 ntBASIC18.82■□□□□ 0.6
SMG6Q86US8 RN7SKP155-201ENST00000516031 288 ntBASIC18.82■□□□□ 0.6
SMG6Q86US8 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC18.82■□□□□ 0.6
SMG6Q86US8 NT5C-204ENST00000578337 582 ntTSL 2 BASIC18.82■□□□□ 0.6
SMG6Q86US8 AC011247.3-201ENST00000603297 438 ntBASIC18.82■□□□□ 0.6
SMG6Q86US8 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC18.82■□□□□ 0.6
SMG6Q86US8 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMG6Q86US8 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
SMG6Q86US8 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SMG6Q86US8 AC108024.1-201ENST00000626286 1721 ntBASIC18.81■□□□□ 0.6
SMG6Q86US8 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms