Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC15.66■□□□□ 0.1
CCNA1P78396 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC15.66■□□□□ 0.1
CCNA1P78396 GRAMD4P6-201ENST00000556999 244 ntBASIC15.66■□□□□ 0.1
CCNA1P78396 AC018845.3-201ENST00000562536 516 ntTSL 3 BASIC15.66■□□□□ 0.1
CCNA1P78396 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC15.66■□□□□ 0.1
CCNA1P78396 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC15.66■□□□□ 0.1
CCNA1P78396 SEPT4-AS1-203ENST00000580769 1000 ntTSL 3 BASIC15.66■□□□□ 0.1
CCNA1P78396 AC132812.1-201ENST00000583145 892 ntBASIC15.66■□□□□ 0.1
CCNA1P78396 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC15.66■□□□□ 0.1
CCNA1P78396 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCNA1P78396 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.66■□□□□ 0.1
CCNA1P78396 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.66■□□□□ 0.1
CCNA1P78396 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CCNA1P78396 UCP2-202ENST00000536983 1413 ntTSL 5 BASIC15.66■□□□□ 0.1
CCNA1P78396 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCNA1P78396 AC245140.2-201ENST00000624054 1939 ntBASIC15.66■□□□□ 0.1
CCNA1P78396 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCNA1P78396 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCNA1P78396 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCNA1P78396 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.66■□□□□ 0.1
CCNA1P78396 AC089987.1-201ENST00000551654 2209 ntBASIC15.66■□□□□ 0.1
CCNA1P78396 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCNA1P78396 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCNA1P78396 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCNA1P78396 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CCNA1P78396 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
CCNA1P78396 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCNA1P78396 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.65■□□□□ 0.1
CCNA1P78396 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCNA1P78396 FMO6P-201ENST00000236166 1620 ntBASIC15.65■□□□□ 0.1
CCNA1P78396 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCNA1P78396 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.65■□□□□ 0.1
CCNA1P78396 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.65■□□□□ 0.1
CCNA1P78396 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCNA1P78396 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCNA1P78396 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCNA1P78396 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCNA1P78396 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC15.65■□□□□ 0.1
CCNA1P78396 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CCNA1P78396 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCNA1P78396 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCNA1P78396 OR2T8-201ENST00000319968 939 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
CCNA1P78396 HAX1-201ENST00000328703 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCNA1P78396 AL359649.1-202ENST00000375713 443 ntTSL 5 BASIC15.65■□□□□ 0.1
CCNA1P78396 UBIAD1-201ENST00000376804 825 ntTSL 2 BASIC15.65■□□□□ 0.1
CCNA1P78396 SH3BGR-202ENST00000380631 780 ntTSL 5 BASIC15.65■□□□□ 0.1
CCNA1P78396 ACOT6-201ENST00000381139 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCNA1P78396 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCNA1P78396 KCNK15-AS1-203ENST00000427598 862 ntTSL 2 BASIC15.65■□□□□ 0.1
CCNA1P78396 AC004895.1-203ENST00000428901 540 ntTSL 4 BASIC15.65■□□□□ 0.1
CCNA1P78396 AC023141.7-201ENST00000430646 407 ntBASIC15.65■□□□□ 0.1
CCNA1P78396 PGK1P2-201ENST00000431702 1214 ntBASIC15.65■□□□□ 0.1
CCNA1P78396 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC15.65■□□□□ 0.1
CCNA1P78396 LINC00399-201ENST00000439008 414 ntTSL 2 BASIC15.65■□□□□ 0.1
CCNA1P78396 AC098820.2-201ENST00000457694 666 ntTSL 5 BASIC15.65■□□□□ 0.1
CCNA1P78396 TMEM222-203ENST00000464813 1071 ntTSL 2 BASIC15.65■□□□□ 0.1
CCNA1P78396 NDUFB2P1-201ENST00000506966 295 ntBASIC15.65■□□□□ 0.1
CCNA1P78396 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCNA1P78396 SRPK2P-201ENST00000523408 1100 ntBASIC15.65■□□□□ 0.1
CCNA1P78396 SLC25A3-206ENST00000547534 556 ntTSL 2 BASIC15.65■□□□□ 0.1
CCNA1P78396 AC010202.1-201ENST00000551181 405 ntBASIC15.65■□□□□ 0.1
CCNA1P78396 AC073896.4-201ENST00000553176 403 ntTSL 2 BASIC15.65■□□□□ 0.1
CCNA1P78396 AC011489.1-201ENST00000586744 690 ntTSL 3 BASIC15.65■□□□□ 0.1
CCNA1P78396 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC15.65■□□□□ 0.1
CCNA1P78396 PTPN20CP-201ENST00000614090 920 ntBASIC15.65■□□□□ 0.1
CCNA1P78396 AC020922.4-201ENST00000621389 339 ntBASIC15.65■□□□□ 0.1
CCNA1P78396 CASP16P-204ENST00000635032 809 ntBASIC15.65■□□□□ 0.1
CCNA1P78396 AL590094.1-208ENST00000636917 627 ntTSL 5 BASIC15.65■□□□□ 0.1
CCNA1P78396 OR2T8-202ENST00000641945 1226 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
CCNA1P78396 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCNA1P78396 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC15.65■□□□□ 0.1
CCNA1P78396 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC15.65■□□□□ 0.1
CCNA1P78396 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CCNA1P78396 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCNA1P78396 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCNA1P78396 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCNA1P78396 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCNA1P78396 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
CCNA1P78396 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
CCNA1P78396 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCNA1P78396 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCNA1P78396 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CCNA1P78396 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCNA1P78396 AC140479.7-201ENST00000636301 2332 ntBASIC15.65■□□□□ 0.1
CCNA1P78396 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.64■□□□□ 0.1
CCNA1P78396 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC15.64■□□□□ 0.09
CCNA1P78396 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCNA1P78396 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCNA1P78396 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
CCNA1P78396 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCNA1P78396 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC15.64■□□□□ 0.09
CCNA1P78396 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCNA1P78396 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCNA1P78396 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCNA1P78396 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
CCNA1P78396 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCNA1P78396 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.64■□□□□ 0.09
CCNA1P78396 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CCNA1P78396 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CCNA1P78396 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms