Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 AC009955.4-201ENST00000597192 544 ntBASIC12.32□□□□□ -0.44
SEC61A1P61619 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SEC61A1P61619 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
SEC61A1P61619 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC12.32□□□□□ -0.44
SEC61A1P61619 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
SEC61A1P61619 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SEC61A1P61619 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC12.32□□□□□ -0.44
SEC61A1P61619 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SEC61A1P61619 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
SEC61A1P61619 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
SEC61A1P61619 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SEC61A1P61619 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SEC61A1P61619 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC12.32□□□□□ -0.44
SEC61A1P61619 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC12.32□□□□□ -0.44
SEC61A1P61619 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SEC61A1P61619 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SEC61A1P61619 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SEC61A1P61619 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SEC61A1P61619 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SEC61A1P61619 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SEC61A1P61619 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
SEC61A1P61619 AC015819.3-201ENST00000624305 2674 ntBASIC12.32□□□□□ -0.44
SEC61A1P61619 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SEC61A1P61619 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC12.32□□□□□ -0.44
SEC61A1P61619 AL133338.1-201ENST00000565695 1517 ntBASIC12.32□□□□□ -0.44
SEC61A1P61619 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
SEC61A1P61619 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SEC61A1P61619 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SEC61A1P61619 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
SEC61A1P61619 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC12.31□□□□□ -0.44
SEC61A1P61619 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
SEC61A1P61619 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SEC61A1P61619 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
SEC61A1P61619 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SEC61A1P61619 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
SEC61A1P61619 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SEC61A1P61619 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SEC61A1P61619 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC12.31□□□□□ -0.44
SEC61A1P61619 STK3-218ENST00000617590 2485 ntTSL 5 BASIC12.31□□□□□ -0.44
SEC61A1P61619 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC12.31□□□□□ -0.44
SEC61A1P61619 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SEC61A1P61619 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SEC61A1P61619 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC12.31□□□□□ -0.44
SEC61A1P61619 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC12.31□□□□□ -0.44
SEC61A1P61619 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SEC61A1P61619 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SEC61A1P61619 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SEC61A1P61619 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SEC61A1P61619 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SEC61A1P61619 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC12.31□□□□□ -0.44
SEC61A1P61619 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC12.31□□□□□ -0.44
SEC61A1P61619 AC010141.1-201ENST00000411585 623 ntBASIC12.31□□□□□ -0.44
SEC61A1P61619 NME6-203ENST00000415644 849 ntTSL 2 BASIC12.31□□□□□ -0.44
SEC61A1P61619 NKAIN1P1-201ENST00000435754 582 ntBASIC12.31□□□□□ -0.44
SEC61A1P61619 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC12.31□□□□□ -0.44
SEC61A1P61619 AC126915.1-201ENST00000522847 1038 ntBASIC12.31□□□□□ -0.44
SEC61A1P61619 AC131206.1-201ENST00000538078 1211 ntBASIC12.31□□□□□ -0.44
SEC61A1P61619 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC12.31□□□□□ -0.44
SEC61A1P61619 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SEC61A1P61619 AC103810.3-201ENST00000583567 96 ntBASIC12.31□□□□□ -0.44
SEC61A1P61619 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC12.31□□□□□ -0.44
SEC61A1P61619 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
SEC61A1P61619 AL162426.1-201ENST00000624141 743 ntBASIC12.31□□□□□ -0.44
SEC61A1P61619 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC12.31□□□□□ -0.44
SEC61A1P61619 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SEC61A1P61619 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
SEC61A1P61619 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
SEC61A1P61619 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
SEC61A1P61619 RPS27L-201ENST00000330964 6434 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SEC61A1P61619 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SEC61A1P61619 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SEC61A1P61619 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
SEC61A1P61619 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
SEC61A1P61619 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SEC61A1P61619 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC12.31□□□□□ -0.44
SEC61A1P61619 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SEC61A1P61619 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SEC61A1P61619 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
SEC61A1P61619 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC12.31□□□□□ -0.44
SEC61A1P61619 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SEC61A1P61619 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SEC61A1P61619 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
SEC61A1P61619 AGAP12P-201ENST00000585227 2359 ntBASIC12.3□□□□□ -0.44
SEC61A1P61619 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC12.3□□□□□ -0.44
SEC61A1P61619 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC12.3□□□□□ -0.44
SEC61A1P61619 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SEC61A1P61619 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
SEC61A1P61619 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SEC61A1P61619 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SEC61A1P61619 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SEC61A1P61619 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
SEC61A1P61619 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC12.3□□□□□ -0.44
SEC61A1P61619 MYCBP-201ENST00000397572 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SEC61A1P61619 CARS-214ENST00000529772 2637 ntTSL 2 BASIC12.3□□□□□ -0.44
SEC61A1P61619 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SEC61A1P61619 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
SEC61A1P61619 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SEC61A1P61619 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SEC61A1P61619 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SEC61A1P61619 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms