Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CACNA2D1P54289 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC14.8□□□□□ -0.04
CACNA2D1P54289 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC14.8□□□□□ -0.04
CACNA2D1P54289 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CACNA2D1P54289 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
CACNA2D1P54289 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CACNA2D1P54289 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CACNA2D1P54289 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CACNA2D1P54289 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CACNA2D1P54289 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CACNA2D1P54289 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CACNA2D1P54289 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CACNA2D1P54289 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CACNA2D1P54289 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
CACNA2D1P54289 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CACNA2D1P54289 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
CACNA2D1P54289 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CACNA2D1P54289 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CACNA2D1P54289 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CACNA2D1P54289 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC14.79□□□□□ -0.04
CACNA2D1P54289 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CACNA2D1P54289 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CACNA2D1P54289 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CACNA2D1P54289 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC14.79□□□□□ -0.04
CACNA2D1P54289 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CACNA2D1P54289 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC14.79□□□□□ -0.04
CACNA2D1P54289 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CACNA2D1P54289 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC14.79□□□□□ -0.04
CACNA2D1P54289 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC14.79□□□□□ -0.04
CACNA2D1P54289 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC14.79□□□□□ -0.04
CACNA2D1P54289 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC14.79□□□□□ -0.04
CACNA2D1P54289 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CACNA2D1P54289 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CACNA2D1P54289 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CACNA2D1P54289 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC14.79□□□□□ -0.04
CACNA2D1P54289 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC14.79□□□□□ -0.04
CACNA2D1P54289 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC14.79□□□□□ -0.04
CACNA2D1P54289 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC14.79□□□□□ -0.04
CACNA2D1P54289 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC14.79□□□□□ -0.04
CACNA2D1P54289 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CACNA2D1P54289 NAT9-224ENST00000583757 583 ntTSL 3 BASIC14.79□□□□□ -0.04
CACNA2D1P54289 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC14.79□□□□□ -0.04
CACNA2D1P54289 AC091769.1-201ENST00000619576 568 ntBASIC14.79□□□□□ -0.04
CACNA2D1P54289 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CACNA2D1P54289 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CACNA2D1P54289 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CACNA2D1P54289 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CACNA2D1P54289 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC14.79□□□□□ -0.04
CACNA2D1P54289 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CACNA2D1P54289 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CACNA2D1P54289 C2-206ENST00000442278 2434 ntTSL 2 BASIC14.78□□□□□ -0.04
CACNA2D1P54289 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CACNA2D1P54289 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC14.78□□□□□ -0.04
CACNA2D1P54289 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
CACNA2D1P54289 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CACNA2D1P54289 AC008620.2-201ENST00000510294 1569 ntBASIC14.78□□□□□ -0.04
CACNA2D1P54289 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CACNA2D1P54289 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CACNA2D1P54289 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
CACNA2D1P54289 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CACNA2D1P54289 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CACNA2D1P54289 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CACNA2D1P54289 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CACNA2D1P54289 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CACNA2D1P54289 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CACNA2D1P54289 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CACNA2D1P54289 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CACNA2D1P54289 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC14.78□□□□□ -0.04
CACNA2D1P54289 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC14.78□□□□□ -0.04
CACNA2D1P54289 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC14.78□□□□□ -0.04
CACNA2D1P54289 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC14.78□□□□□ -0.04
CACNA2D1P54289 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC14.78□□□□□ -0.04
CACNA2D1P54289 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CACNA2D1P54289 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC14.78□□□□□ -0.04
CACNA2D1P54289 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC14.78□□□□□ -0.04
CACNA2D1P54289 AC008267.1-201ENST00000474858 1069 ntBASIC14.78□□□□□ -0.04
CACNA2D1P54289 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC14.78□□□□□ -0.04
CACNA2D1P54289 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC14.78□□□□□ -0.04
CACNA2D1P54289 CFL1-206ENST00000527344 962 ntTSL 2 BASIC14.78□□□□□ -0.04
CACNA2D1P54289 AC068867.1-201ENST00000559855 150 ntBASIC14.78□□□□□ -0.04
CACNA2D1P54289 DNM1P30-201ENST00000563586 452 ntBASIC14.78□□□□□ -0.04
CACNA2D1P54289 AC007250.1-201ENST00000608934 338 ntBASIC14.78□□□□□ -0.04
CACNA2D1P54289 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC14.78□□□□□ -0.04
CACNA2D1P54289 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC14.78□□□□□ -0.04
CACNA2D1P54289 RETN-203ENST00000629642 400 ntTSL 5 BASIC14.78□□□□□ -0.04
CACNA2D1P54289 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CACNA2D1P54289 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CACNA2D1P54289 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CACNA2D1P54289 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC14.78□□□□□ -0.04
CACNA2D1P54289 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CACNA2D1P54289 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CACNA2D1P54289 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CACNA2D1P54289 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CACNA2D1P54289 GOLGA8UP-201ENST00000527159 1755 ntBASIC14.78□□□□□ -0.04
CACNA2D1P54289 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CACNA2D1P54289 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CACNA2D1P54289 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CACNA2D1P54289 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CACNA2D1P54289 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CACNA2D1P54289 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms