Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
APOBEC1P41238 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
APOBEC1P41238 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
APOBEC1P41238 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC12.6□□□□□ -0.39
APOBEC1P41238 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
APOBEC1P41238 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
APOBEC1P41238 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC12.6□□□□□ -0.39
APOBEC1P41238 NME4-203ENST00000397722 1232 ntTSL 2 BASIC12.6□□□□□ -0.39
APOBEC1P41238 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
APOBEC1P41238 MIR1307-201ENST00000408840 149 ntBASIC12.6□□□□□ -0.39
APOBEC1P41238 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC12.6□□□□□ -0.39
APOBEC1P41238 AC018638.5-201ENST00000450885 754 ntBASIC12.6□□□□□ -0.39
APOBEC1P41238 IGHJ2P-201ENST00000454480 60 ntBASIC12.6□□□□□ -0.39
APOBEC1P41238 SCARNA12-201ENST00000459155 270 ntBASIC12.6□□□□□ -0.39
APOBEC1P41238 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC12.6□□□□□ -0.39
APOBEC1P41238 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC12.6□□□□□ -0.39
APOBEC1P41238 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
APOBEC1P41238 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC12.6□□□□□ -0.39
APOBEC1P41238 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC12.6□□□□□ -0.39
APOBEC1P41238 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC12.6□□□□□ -0.39
APOBEC1P41238 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC12.6□□□□□ -0.39
APOBEC1P41238 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC12.6□□□□□ -0.39
APOBEC1P41238 AC097724.1-201ENST00000609581 426 ntBASIC12.6□□□□□ -0.39
APOBEC1P41238 HPX-213ENST00000615166 826 ntTSL 5 BASIC12.6□□□□□ -0.39
APOBEC1P41238 HLA-DQB1-202ENST00000399079 1501 ntBASIC12.6□□□□□ -0.39
APOBEC1P41238 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
APOBEC1P41238 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC12.6□□□□□ -0.39
APOBEC1P41238 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
APOBEC1P41238 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC12.6□□□□□ -0.39
APOBEC1P41238 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
APOBEC1P41238 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
APOBEC1P41238 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
APOBEC1P41238 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC12.6□□□□□ -0.39
APOBEC1P41238 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
APOBEC1P41238 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC12.6□□□□□ -0.39
APOBEC1P41238 DGCR9-201ENST00000609630 2415 ntBASIC12.6□□□□□ -0.39
APOBEC1P41238 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
APOBEC1P41238 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
APOBEC1P41238 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
APOBEC1P41238 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
APOBEC1P41238 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
APOBEC1P41238 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC12.6□□□□□ -0.39
APOBEC1P41238 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
APOBEC1P41238 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
APOBEC1P41238 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
APOBEC1P41238 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
APOBEC1P41238 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
APOBEC1P41238 AC073869.1-201ENST00000415574 2762 ntBASIC12.59□□□□□ -0.39
APOBEC1P41238 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
APOBEC1P41238 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC12.59□□□□□ -0.39
APOBEC1P41238 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
APOBEC1P41238 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
APOBEC1P41238 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
APOBEC1P41238 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
APOBEC1P41238 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
APOBEC1P41238 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
APOBEC1P41238 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
APOBEC1P41238 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
APOBEC1P41238 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
APOBEC1P41238 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
APOBEC1P41238 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC12.59□□□□□ -0.39
APOBEC1P41238 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
APOBEC1P41238 AL627231.1-201ENST00000394467 1125 ntBASIC12.59□□□□□ -0.39
APOBEC1P41238 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC12.59□□□□□ -0.39
APOBEC1P41238 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC12.59□□□□□ -0.39
APOBEC1P41238 AC234782.1-201ENST00000451950 919 ntBASIC12.59□□□□□ -0.39
APOBEC1P41238 GRPEL2P1-201ENST00000453145 339 ntBASIC12.59□□□□□ -0.39
APOBEC1P41238 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC12.59□□□□□ -0.39
APOBEC1P41238 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
APOBEC1P41238 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC12.59□□□□□ -0.39
APOBEC1P41238 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC12.59□□□□□ -0.39
APOBEC1P41238 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC12.59□□□□□ -0.39
APOBEC1P41238 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC12.59□□□□□ -0.39
APOBEC1P41238 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC12.59□□□□□ -0.39
APOBEC1P41238 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
APOBEC1P41238 CDK7-214ENST00000626796 358 ntTSL 5 BASIC12.59□□□□□ -0.39
APOBEC1P41238 GARS-210ENST00000627489 324 ntTSL 4 BASIC12.59□□□□□ -0.39
APOBEC1P41238 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC12.59□□□□□ -0.39
APOBEC1P41238 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
APOBEC1P41238 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC12.59□□□□□ -0.39
APOBEC1P41238 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
APOBEC1P41238 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
APOBEC1P41238 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
APOBEC1P41238 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
APOBEC1P41238 F2-205ENST00000530231 1849 ntTSL 5 BASIC12.59□□□□□ -0.39
APOBEC1P41238 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
APOBEC1P41238 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
APOBEC1P41238 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
APOBEC1P41238 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
APOBEC1P41238 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC12.59□□□□□ -0.39
APOBEC1P41238 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC12.59□□□□□ -0.39
APOBEC1P41238 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC12.59□□□□□ -0.39
APOBEC1P41238 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC12.59□□□□□ -0.39
APOBEC1P41238 DDC-204ENST00000426377 1700 ntTSL 3 BASIC12.59□□□□□ -0.39
APOBEC1P41238 PES1P2-201ENST00000449745 1735 ntBASIC12.59□□□□□ -0.39
APOBEC1P41238 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
APOBEC1P41238 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
APOBEC1P41238 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
APOBEC1P41238 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
APOBEC1P41238 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms