Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CHRNA3P32297 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CHRNA3P32297 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHRNA3P32297 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHRNA3P32297 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHRNA3P32297 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHRNA3P32297 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHRNA3P32297 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CHRNA3P32297 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CHRNA3P32297 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC14.74□□□□□ -0.05
CHRNA3P32297 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHRNA3P32297 AL358781.1-202ENST00000321081 1360 ntBASIC14.74□□□□□ -0.05
CHRNA3P32297 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC14.74□□□□□ -0.05
CHRNA3P32297 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHRNA3P32297 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC14.74□□□□□ -0.05
CHRNA3P32297 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CHRNA3P32297 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC14.74□□□□□ -0.05
CHRNA3P32297 AC115284.2-201ENST00000624646 2054 ntBASIC14.74□□□□□ -0.05
CHRNA3P32297 AC004899.2-201ENST00000622993 3860 ntBASIC14.74□□□□□ -0.05
CHRNA3P32297 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC14.74□□□□□ -0.05
CHRNA3P32297 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHRNA3P32297 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CHRNA3P32297 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
CHRNA3P32297 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHRNA3P32297 AL133466.1-201ENST00000447582 150 ntBASIC14.74□□□□□ -0.05
CHRNA3P32297 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CHRNA3P32297 AC140658.4-201ENST00000561990 352 ntBASIC14.74□□□□□ -0.05
CHRNA3P32297 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CHRNA3P32297 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHRNA3P32297 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC14.74□□□□□ -0.05
CHRNA3P32297 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC14.74□□□□□ -0.05
CHRNA3P32297 AC068587.10-201ENST00000641210 219 ntBASIC14.74□□□□□ -0.05
CHRNA3P32297 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHRNA3P32297 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHRNA3P32297 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CHRNA3P32297 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC14.74□□□□□ -0.05
CHRNA3P32297 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC14.74□□□□□ -0.05
CHRNA3P32297 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHRNA3P32297 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC14.74□□□□□ -0.05
CHRNA3P32297 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHRNA3P32297 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC14.74□□□□□ -0.05
CHRNA3P32297 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC14.74□□□□□ -0.05
CHRNA3P32297 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CHRNA3P32297 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CHRNA3P32297 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CHRNA3P32297 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHRNA3P32297 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC14.74□□□□□ -0.05
CHRNA3P32297 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
CHRNA3P32297 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CHRNA3P32297 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CHRNA3P32297 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC14.73□□□□□ -0.05
CHRNA3P32297 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CHRNA3P32297 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CHRNA3P32297 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CHRNA3P32297 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC14.73□□□□□ -0.05
CHRNA3P32297 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC14.73□□□□□ -0.05
CHRNA3P32297 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
CHRNA3P32297 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CHRNA3P32297 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CHRNA3P32297 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CHRNA3P32297 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CHRNA3P32297 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CHRNA3P32297 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CHRNA3P32297 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CHRNA3P32297 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CHRNA3P32297 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CHRNA3P32297 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
CHRNA3P32297 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CHRNA3P32297 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
CHRNA3P32297 CMC1-204ENST00000423894 549 ntTSL 2 BASIC14.73□□□□□ -0.05
CHRNA3P32297 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC14.73□□□□□ -0.05
CHRNA3P32297 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC14.73□□□□□ -0.05
CHRNA3P32297 MSRA-203ENST00000441698 788 ntTSL 2 BASIC14.73□□□□□ -0.05
CHRNA3P32297 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC14.73□□□□□ -0.05
CHRNA3P32297 AC024681.1-201ENST00000521917 487 ntBASIC14.73□□□□□ -0.05
CHRNA3P32297 AC090857.1-201ENST00000527400 390 ntBASIC14.73□□□□□ -0.05
CHRNA3P32297 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC14.73□□□□□ -0.05
CHRNA3P32297 AL161670.2-201ENST00000557650 1227 ntBASIC14.73□□□□□ -0.05
CHRNA3P32297 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC14.73□□□□□ -0.05
CHRNA3P32297 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC14.73□□□□□ -0.05
CHRNA3P32297 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CHRNA3P32297 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
CHRNA3P32297 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CHRNA3P32297 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC14.73□□□□□ -0.05
CHRNA3P32297 DDX5-235ENST00000630471 473 ntTSL 4 BASIC14.73□□□□□ -0.05
CHRNA3P32297 RAN-210ENST00000541630 1475 ntTSL 2 BASIC14.73□□□□□ -0.05
CHRNA3P32297 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC14.73□□□□□ -0.05
CHRNA3P32297 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CHRNA3P32297 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC14.73□□□□□ -0.05
CHRNA3P32297 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CHRNA3P32297 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
CHRNA3P32297 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC14.73□□□□□ -0.05
CHRNA3P32297 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CHRNA3P32297 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CHRNA3P32297 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CHRNA3P32297 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC14.73□□□□□ -0.05
CHRNA3P32297 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
CHRNA3P32297 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CHRNA3P32297 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CHRNA3P32297 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms