Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
PRKCAP17252 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PRKCAP17252 CRCP-204ENST00000398684 492 ntTSL 2 BASIC13.01□□□□□ -0.33
PRKCAP17252 MIR1247-201ENST00000408206 136 ntBASIC13.01□□□□□ -0.33
PRKCAP17252 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
PRKCAP17252 AC016700.1-201ENST00000429424 312 ntBASIC13.01□□□□□ -0.33
PRKCAP17252 TSPY25P-201ENST00000429463 745 ntBASIC13.01□□□□□ -0.33
PRKCAP17252 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PRKCAP17252 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC13.01□□□□□ -0.33
PRKCAP17252 AC011742.3-201ENST00000439053 820 ntBASIC13.01□□□□□ -0.33
PRKCAP17252 KRT8P13-201ENST00000463294 1010 ntBASIC13.01□□□□□ -0.33
PRKCAP17252 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
PRKCAP17252 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
PRKCAP17252 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC13.01□□□□□ -0.33
PRKCAP17252 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
PRKCAP17252 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC13.01□□□□□ -0.33
PRKCAP17252 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC13.01□□□□□ -0.33
PRKCAP17252 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC13.01□□□□□ -0.33
PRKCAP17252 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC13.01□□□□□ -0.33
PRKCAP17252 AC020914.3-201ENST00000594712 304 ntBASIC13.01□□□□□ -0.33
PRKCAP17252 AL645939.5-201ENST00000606834 243 ntBASIC13.01□□□□□ -0.33
PRKCAP17252 MIR6799-201ENST00000620297 69 ntBASIC13.01□□□□□ -0.33
PRKCAP17252 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
PRKCAP17252 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
PRKCAP17252 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
PRKCAP17252 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
PRKCAP17252 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC13.01□□□□□ -0.33
PRKCAP17252 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC13.01□□□□□ -0.33
PRKCAP17252 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PRKCAP17252 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
PRKCAP17252 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
PRKCAP17252 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PRKCAP17252 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
PRKCAP17252 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PRKCAP17252 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
PRKCAP17252 AL157996.1-201ENST00000624684 2299 ntBASIC13.01□□□□□ -0.33
PRKCAP17252 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
PRKCAP17252 HERC3-203ENST00000407637 2634 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
PRKCAP17252 SLC28A1-203ENST00000394573 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PRKCAP17252 ZFYVE27-201ENST00000337540 2927 ntTSL 2 BASIC13.01□□□□□ -0.33
PRKCAP17252 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC13.01□□□□□ -0.33
PRKCAP17252 AC145098.2-201ENST00000623593 3026 ntBASIC13.01□□□□□ -0.33
PRKCAP17252 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
PRKCAP17252 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
PRKCAP17252 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
PRKCAP17252 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PRKCAP17252 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
PRKCAP17252 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC13□□□□□ -0.33
PRKCAP17252 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC13□□□□□ -0.33
PRKCAP17252 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
PRKCAP17252 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
PRKCAP17252 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
PRKCAP17252 FRMD1-205ENST00000440994 2857 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
PRKCAP17252 AC111170.3-201ENST00000624282 2464 ntBASIC13□□□□□ -0.33
PRKCAP17252 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC13□□□□□ -0.33
PRKCAP17252 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC13□□□□□ -0.33
PRKCAP17252 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PRKCAP17252 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC13□□□□□ -0.33
PRKCAP17252 SIX1-203ENST00000554986 1959 ntTSL 3 BASIC13□□□□□ -0.33
PRKCAP17252 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
PRKCAP17252 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC13□□□□□ -0.33
PRKCAP17252 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
PRKCAP17252 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC13□□□□□ -0.33
PRKCAP17252 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC13□□□□□ -0.33
PRKCAP17252 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC13□□□□□ -0.33
PRKCAP17252 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PRKCAP17252 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC13□□□□□ -0.33
PRKCAP17252 KRT8P21-201ENST00000430398 1491 ntBASIC13□□□□□ -0.33
PRKCAP17252 AC007952.5-201ENST00000572818 1486 ntBASIC13□□□□□ -0.33
PRKCAP17252 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
PRKCAP17252 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC13□□□□□ -0.33
PRKCAP17252 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PRKCAP17252 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC13□□□□□ -0.33
PRKCAP17252 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PRKCAP17252 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PRKCAP17252 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC13□□□□□ -0.33
PRKCAP17252 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC13□□□□□ -0.33
PRKCAP17252 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC13□□□□□ -0.33
PRKCAP17252 HNRNPA1P41-201ENST00000397777 928 ntBASIC13□□□□□ -0.33
PRKCAP17252 SLC16A6P1-201ENST00000413214 1059 ntBASIC13□□□□□ -0.33
PRKCAP17252 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC13□□□□□ -0.33
PRKCAP17252 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC13□□□□□ -0.33
PRKCAP17252 KRT18P15-201ENST00000458108 1291 ntBASIC13□□□□□ -0.33
PRKCAP17252 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC13□□□□□ -0.33
PRKCAP17252 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC13□□□□□ -0.33
PRKCAP17252 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC13□□□□□ -0.33
PRKCAP17252 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC13□□□□□ -0.33
PRKCAP17252 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC13□□□□□ -0.33
PRKCAP17252 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC13□□□□□ -0.33
PRKCAP17252 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC13□□□□□ -0.33
PRKCAP17252 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC13□□□□□ -0.33
PRKCAP17252 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
PRKCAP17252 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
PRKCAP17252 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC13□□□□□ -0.33
PRKCAP17252 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC13□□□□□ -0.33
PRKCAP17252 AL805961.1-203ENST00000641078 1258 ntBASIC13□□□□□ -0.33
PRKCAP17252 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC13□□□□□ -0.33
PRKCAP17252 TRPM5-203ENST00000533060 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
PRKCAP17252 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PRKCAP17252 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms