Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHB13Q9Y5F0 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHB13Q9Y5F0 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHB13Q9Y5F0 LINC00115-201ENST00000473798 1317 ntBASIC15.73■□□□□ 0.11
PCDHB13Q9Y5F0 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC15.73■□□□□ 0.11
PCDHB13Q9Y5F0 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHB13Q9Y5F0 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
PCDHB13Q9Y5F0 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHB13Q9Y5F0 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHB13Q9Y5F0 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
PCDHB13Q9Y5F0 RPL13AP3-202ENST00000494676 1473 ntBASIC15.73■□□□□ 0.11
PCDHB13Q9Y5F0 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
PCDHB13Q9Y5F0 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHB13Q9Y5F0 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
PCDHB13Q9Y5F0 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHB13Q9Y5F0 USP39-207ENST00000450066 2086 ntTSL 2 BASIC15.73■□□□□ 0.11
PCDHB13Q9Y5F0 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHB13Q9Y5F0 YAE1D1-201ENST00000223273 899 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHB13Q9Y5F0 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHB13Q9Y5F0 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHB13Q9Y5F0 AL589826.1-201ENST00000340697 249 ntBASIC15.73■□□□□ 0.11
PCDHB13Q9Y5F0 LGALS14-201ENST00000360675 773 ntAPPRIS P3 TSL 3 BASIC15.73■□□□□ 0.11
PCDHB13Q9Y5F0 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHB13Q9Y5F0 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHB13Q9Y5F0 AGER-203ENST00000375065 665 ntTSL 2 BASIC15.73■□□□□ 0.11
PCDHB13Q9Y5F0 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC15.73■□□□□ 0.11
PCDHB13Q9Y5F0 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
PCDHB13Q9Y5F0 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHB13Q9Y5F0 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHB13Q9Y5F0 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHB13Q9Y5F0 RPSAP41-201ENST00000439695 860 ntBASIC15.73■□□□□ 0.11
PCDHB13Q9Y5F0 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC15.73■□□□□ 0.11
PCDHB13Q9Y5F0 BX284668.4-201ENST00000453917 508 ntBASIC15.73■□□□□ 0.11
PCDHB13Q9Y5F0 AKR7A2P1-201ENST00000460134 915 ntBASIC15.73■□□□□ 0.11
PCDHB13Q9Y5F0 ZNF767P-206ENST00000513792 565 ntBASIC15.73■□□□□ 0.11
PCDHB13Q9Y5F0 SCARNA20.5-201ENST00000516991 142 ntBASIC15.73■□□□□ 0.11
PCDHB13Q9Y5F0 AC023194.3-201ENST00000522679 277 ntTSL 3 BASIC15.73■□□□□ 0.11
PCDHB13Q9Y5F0 KNTC1-206ENST00000534995 1065 ntTSL 2 BASIC15.73■□□□□ 0.11
PCDHB13Q9Y5F0 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC15.73■□□□□ 0.11
PCDHB13Q9Y5F0 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC15.73■□□□□ 0.11
PCDHB13Q9Y5F0 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC15.73■□□□□ 0.11
PCDHB13Q9Y5F0 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC15.73■□□□□ 0.11
PCDHB13Q9Y5F0 AC012467.1-201ENST00000607740 256 ntBASIC15.73■□□□□ 0.11
PCDHB13Q9Y5F0 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC15.73■□□□□ 0.11
PCDHB13Q9Y5F0 AL392048.1-201ENST00000613946 534 ntBASIC15.73■□□□□ 0.11
PCDHB13Q9Y5F0 AC090116.1-201ENST00000615679 446 ntBASIC15.73■□□□□ 0.11
PCDHB13Q9Y5F0 AC090772.4-201ENST00000623599 362 ntBASIC15.73■□□□□ 0.11
PCDHB13Q9Y5F0 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
PCDHB13Q9Y5F0 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHB13Q9Y5F0 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHB13Q9Y5F0 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
PCDHB13Q9Y5F0 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC15.73■□□□□ 0.11
PCDHB13Q9Y5F0 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHB13Q9Y5F0 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC15.73■□□□□ 0.11
PCDHB13Q9Y5F0 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHB13Q9Y5F0 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
PCDHB13Q9Y5F0 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHB13Q9Y5F0 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
PCDHB13Q9Y5F0 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHB13Q9Y5F0 AC020907.1-201ENST00000616460 1350 ntBASIC15.73■□□□□ 0.11
PCDHB13Q9Y5F0 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC15.73■□□□□ 0.11
PCDHB13Q9Y5F0 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHB13Q9Y5F0 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC15.73■□□□□ 0.11
PCDHB13Q9Y5F0 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC15.73■□□□□ 0.11
PCDHB13Q9Y5F0 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHB13Q9Y5F0 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
PCDHB13Q9Y5F0 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHB13Q9Y5F0 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
PCDHB13Q9Y5F0 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
PCDHB13Q9Y5F0 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC15.72■□□□□ 0.11
PCDHB13Q9Y5F0 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHB13Q9Y5F0 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC15.72■□□□□ 0.11
PCDHB13Q9Y5F0 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
PCDHB13Q9Y5F0 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHB13Q9Y5F0 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC15.72■□□□□ 0.11
PCDHB13Q9Y5F0 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHB13Q9Y5F0 FGL1-201ENST00000381840 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHB13Q9Y5F0 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC15.72■□□□□ 0.11
PCDHB13Q9Y5F0 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC15.72■□□□□ 0.11
PCDHB13Q9Y5F0 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHB13Q9Y5F0 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHB13Q9Y5F0 USP39-220ENST00000613444 2161 ntTSL 2 BASIC15.72■□□□□ 0.11
PCDHB13Q9Y5F0 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
PCDHB13Q9Y5F0 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHB13Q9Y5F0 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
PCDHB13Q9Y5F0 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHB13Q9Y5F0 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC15.72■□□□□ 0.11
PCDHB13Q9Y5F0 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHB13Q9Y5F0 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC15.72■□□□□ 0.11
PCDHB13Q9Y5F0 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC15.72■□□□□ 0.11
PCDHB13Q9Y5F0 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHB13Q9Y5F0 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHB13Q9Y5F0 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHB13Q9Y5F0 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHB13Q9Y5F0 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHB13Q9Y5F0 AC239868.1-201ENST00000369385 493 ntBASIC15.72■□□□□ 0.11
PCDHB13Q9Y5F0 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC15.72■□□□□ 0.11
PCDHB13Q9Y5F0 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHB13Q9Y5F0 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC15.72■□□□□ 0.11
PCDHB13Q9Y5F0 LYRM7-203ENST00000510516 604 ntTSL 2 BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms