RNA–Protein interactions for RNA: ENST00000534995.1

KNTC1-206, Transcript of kinetochore associated 1, humanhuman

TSL 2 BASIC

Gene KNTC1, Length 1,065 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-206ENST00000534995 AEBP2Q6ZN18 517 aaPredicted RBP31.05■■■□□ 2.56
KNTC1-206ENST00000534995 CHIC1Q5VXU3 224 aa30.37■■■□□ 2.45
KNTC1-206ENST00000534995 PHF23Q9BUL5 403 aaPredicted RBP26.83■■□□□ 1.89
KNTC1-206ENST00000534995 SENP3Q9H4L4 574 aaPredicted RBP26.11■■□□□ 1.77
KNTC1-206ENST00000534995 PLPPR3Q6T4P5 718 aa24.64■■□□□ 1.54
KNTC1-206ENST00000534995 FOXD1Q16676 465 aa24.35■■□□□ 1.49
KNTC1-206ENST00000534995 PPP6R1Q9UPN7 881 aa23.63■■□□□ 1.37
KNTC1-206ENST00000534995 ADRA2BP18089 450 aa23.56■■□□□ 1.36
KNTC1-206ENST00000534995 PIAS4Q8N2W9 510 aaPredicted RBP22.91■■□□□ 1.26
KNTC1-206ENST00000534995 MSH5O43196 834 aa22.23■■□□□ 1.15
KNTC1-206ENST00000534995 PPP4R3CPQ6ZMV5 832 aa21.8■■□□□ 1.08
KNTC1-206ENST00000534995 KCNA4P22459 653 aa21.55■■□□□ 1.04
KNTC1-206ENST00000534995 MAPK8IP2Q13387 824 aaPredicted RBP21.37■■□□□ 1.01
KNTC1-206ENST00000534995 SCAF1Q9H7N4 1312 aaKnown RBP21.32■■□□□ 1
KNTC1-206ENST00000534995 NCBP3Q53F19 620 aaKnown RBP21.13■□□□□ 0.97
KNTC1-206ENST00000534995 CNKSR2Q8WXI2 1034 aa21.1■□□□□ 0.97
KNTC1-206ENST00000534995 NPM3O75607 178 aaKnown RBP21■□□□□ 0.95
KNTC1-206ENST00000534995 DMRT2Q9Y5R5 561 aa20.93■□□□□ 0.94
KNTC1-206ENST00000534995 RNF216Q9NWF9 866 aaPredicted RBP20.65■□□□□ 0.9
KNTC1-206ENST00000534995 HOXD11P31277 338 aaPredicted RBP20.58■□□□□ 0.89
KNTC1-206ENST00000534995 SLC4A1APQ9BWU0 796 aaKnown RBP20.45■□□□□ 0.86
KNTC1-206ENST00000534995 DNAJC5BQ9UF47 199 aa20.32■□□□□ 0.84
KNTC1-206ENST00000534995 EHMT2Q96KQ7 1210 aa20.11■□□□□ 0.81
KNTC1-206ENST00000534995 POTEDQ86YR6 584 aa20.09■□□□□ 0.81
KNTC1-206ENST00000534995 DCAF8L1A6NGE4 600 aa19.95■□□□□ 0.78
KNTC1-206ENST00000534995 ZBTB22O15209 634 aa19.91■□□□□ 0.78
KNTC1-206ENST00000534995 CSRNP3Q8WYN3 585 aa19.87■□□□□ 0.77
KNTC1-206ENST00000534995 SLC4A2P04920 1241 aa19.85■□□□□ 0.77
KNTC1-206ENST00000534995 FOXD4L1Q9NU39 408 aa19.69■□□□□ 0.74
KNTC1-206ENST00000534995 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.52■□□□□ 0.72
KNTC1-206ENST00000534995 U3KPZ7 1027 aaPredicted RBP19.35■□□□□ 0.69
KNTC1-206ENST00000534995 MYCNP04198 464 aaPredicted RBP19.3■□□□□ 0.68
KNTC1-206ENST00000534995 RNF39Q9H2S5 420 aa19.17■□□□□ 0.66
KNTC1-206ENST00000534995 ATF5Q9Y2D1 282 aaPredicted RBP18.96■□□□□ 0.63
KNTC1-206ENST00000534995 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.94■□□□□ 0.62
KNTC1-206ENST00000534995 ATXN8OSP0DMR3 200 aa18.94■□□□□ 0.62
KNTC1-206ENST00000534995 HNRNPUL2Q1KMD3 747 aaKnown RBP18.94■□□□□ 0.62
KNTC1-206ENST00000534995 SAMD1Q6SPF0 538 aaPredicted RBP18.94■□□□□ 0.62
KNTC1-206ENST00000534995 C1QBPQ07021 282 aaKnown RBP18.85■□□□□ 0.61
KNTC1-206ENST00000534995 SPINK5Q9NQ38 1064 aaPredicted RBP18.78■□□□□ 0.6
KNTC1-206ENST00000534995 APLP2Q06481 763 aa18.65■□□□□ 0.58
KNTC1-206ENST00000534995 CAPN15O75808 1086 aa18.58■□□□□ 0.56
KNTC1-206ENST00000534995 TRHP20396 242 aaPredicted RBP18.55■□□□□ 0.56
KNTC1-206ENST00000534995 ZNF219Q9P2Y4 722 aaPredicted RBP18.52■□□□□ 0.56
KNTC1-206ENST00000534995 CACNB1Q02641 598 aaPredicted RBP18.47■□□□□ 0.55
KNTC1-206ENST00000534995 ABCB7O75027 752 aa18.32■□□□□ 0.52
KNTC1-206ENST00000534995 DSG3P32926 999 aa18.31■□□□□ 0.52
KNTC1-206ENST00000534995 POLA2Q14181 598 aa18.3■□□□□ 0.52
KNTC1-206ENST00000534995 MKRN4PQ13434 485 aaPredicted RBP18.13■□□□□ 0.49
KNTC1-206ENST00000534995 FBLN2P98095 1184 aa17.9■□□□□ 0.46
KNTC1-206ENST00000534995 FKBP8Q14318 412 aa17.87■□□□□ 0.45
KNTC1-206ENST00000534995 ZBTB12Q9Y330 459 aaPredicted RBP17.87■□□□□ 0.45
KNTC1-206ENST00000534995 OSCARQ8IYS5 282 aa17.71■□□□□ 0.43
KNTC1-206ENST00000534995 SPDYE4A6NLX3 237 aa17.66■□□□□ 0.42
KNTC1-206ENST00000534995 NISCHQ9Y2I1 1504 aa17.56■□□□□ 0.4
KNTC1-206ENST00000534995 SPDYE2BA6NHP3 402 aa17.49■□□□□ 0.39
KNTC1-206ENST00000534995 SPDYE6P0CI01 402 aa17.49■□□□□ 0.39
KNTC1-206ENST00000534995 SPDYE2Q495Y8 402 aa17.49■□□□□ 0.39
KNTC1-206ENST00000534995 PROM2Q8N271 834 aa17.48■□□□□ 0.39
KNTC1-206ENST00000534995 SSUH2Q9Y2M2 353 aa17.46■□□□□ 0.39
KNTC1-206ENST00000534995 ZNF692Q9BU19 519 aaPredicted RBP17.45■□□□□ 0.38
KNTC1-206ENST00000534995 RBM42Q9BTD8 480 aaKnown RBP17.28■□□□□ 0.36
KNTC1-206ENST00000534995 PABPN1Q86U42 306 aaKnown RBP eCLIP17.26■□□□□ 0.352e-6■■■□□ 18.9
KNTC1-206ENST00000534995 AKT1S1Q96B36 256 aa17.17■□□□□ 0.34
KNTC1-206ENST00000534995 REM2Q8IYK8 340 aaPredicted RBP17.07■□□□□ 0.32
KNTC1-206ENST00000534995 FBXO3Q9UK99 471 aa17.05■□□□□ 0.32
KNTC1-206ENST00000534995 VASPP50552 380 aaPredicted RBP16.94■□□□□ 0.3
KNTC1-206ENST00000534995 SPDYE1Q8NFV5 336 aaPredicted RBP16.91■□□□□ 0.3
KNTC1-206ENST00000534995 PITPNM1O00562 1244 aa16.89■□□□□ 0.29
KNTC1-206ENST00000534995 STAG3Q9UJ98 1225 aa16.89■□□□□ 0.29
KNTC1-206ENST00000534995 CLEC11AQ9Y240 323 aa16.86■□□□□ 0.29
KNTC1-206ENST00000534995 IFNLR1Q8IU57 520 aaPredicted RBP16.79■□□□□ 0.28
KNTC1-206ENST00000534995 PRR29P0C7W0 189 aa16.7■□□□□ 0.26
KNTC1-206ENST00000534995 MIER1Q8N108 512 aa16.68■□□□□ 0.26
KNTC1-206ENST00000534995 PLCD3Q8N3E9 789 aa16.66■□□□□ 0.26
KNTC1-206ENST00000534995 CREBZFQ9NS37 354 aa16.65■□□□□ 0.26
KNTC1-206ENST00000534995 RTN4Q9NQC3 1192 aaKnown RBP16.6■□□□□ 0.25
KNTC1-206ENST00000534995 CHRDL2Q6WN34 429 aa16.59■□□□□ 0.25
KNTC1-206ENST00000534995 MNX1P50219 401 aaPredicted RBP16.55■□□□□ 0.24
KNTC1-206ENST00000534995 FXR2P51116 673 aaKnown RBP eCLIP16.54■□□□□ 0.24
KNTC1-206ENST00000534995 CHADLQ6NUI6 762 aa16.53■□□□□ 0.24
KNTC1-206ENST00000534995 KLHL34Q8N239 644 aa16.53■□□□□ 0.24
KNTC1-206ENST00000534995 AMER1Q5JTC6 1135 aaPredicted RBP16.49■□□□□ 0.23
KNTC1-206ENST00000534995 PIP4P2Q8N4L2 257 aa16.47■□□□□ 0.23
KNTC1-206ENST00000534995 SPOCK2Q92563 424 aa16.45■□□□□ 0.22
KNTC1-206ENST00000534995 PLEKHG5O94827 1062 aa16.44■□□□□ 0.22
KNTC1-206ENST00000534995 PRKAR2AP13861 404 aaKnown RBP16.43■□□□□ 0.22
KNTC1-206ENST00000534995 ZBTB47Q9UFB7 747 aaPredicted RBP16.38■□□□□ 0.21
KNTC1-206ENST00000534995 NUBP1P53384 320 aa16.36■□□□□ 0.21
KNTC1-206ENST00000534995 FARP1Q9Y4F1 1045 aaPredicted RBP16.32■□□□□ 0.2
KNTC1-206ENST00000534995 PKD2Q13563 968 aa16.31■□□□□ 0.2
KNTC1-206ENST00000534995 RASEFQ8IZ41 740 aa16.26■□□□□ 0.19
KNTC1-206ENST00000534995 NPM1P06748 294 aaKnown RBP eCLIP16.21■□□□□ 0.19
KNTC1-206ENST00000534995 CIZ1Q9ULV3 898 aaPredicted RBP16.16■□□□□ 0.18
KNTC1-206ENST00000534995 DCAF8Q5TAQ9 597 aa16.11■□□□□ 0.17
KNTC1-206ENST00000534995 FAM212AQ96EL1 285 aa16.08■□□□□ 0.16
KNTC1-206ENST00000534995 GSE1Q14687 1217 aa16.07■□□□□ 0.16
KNTC1-206ENST00000534995 ECM2O94769 699 aaPredicted RBP16.06■□□□□ 0.16
KNTC1-206ENST00000534995 TSPYL2Q9H2G4 693 aaPredicted RBP16.06■□□□□ 0.16
KNTC1-206ENST00000534995 RGL2O15211 777 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms