Protein–RNA interactions for Protein: Q9UHC6

CNTNAP2, Contactin-associated protein-like 2, humanhuman

Predictions only

Length 1,331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP2Q9UHC6 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CNTNAP2Q9UHC6 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CNTNAP2Q9UHC6 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
CNTNAP2Q9UHC6 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CNTNAP2Q9UHC6 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC15.15■□□□□ 0.02
CNTNAP2Q9UHC6 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CNTNAP2Q9UHC6 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CNTNAP2Q9UHC6 SSR4-202ENST00000370085 526 ntTSL 2 BASIC15.15■□□□□ 0.02
CNTNAP2Q9UHC6 OR7E115P-201ENST00000382617 1024 ntBASIC15.15■□□□□ 0.02
CNTNAP2Q9UHC6 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CNTNAP2Q9UHC6 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC15.15■□□□□ 0.02
CNTNAP2Q9UHC6 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC15.15■□□□□ 0.02
CNTNAP2Q9UHC6 AC100858.1-201ENST00000514059 1228 ntBASIC15.15■□□□□ 0.02
CNTNAP2Q9UHC6 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC15.15■□□□□ 0.02
CNTNAP2Q9UHC6 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CNTNAP2Q9UHC6 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC15.15■□□□□ 0.02
CNTNAP2Q9UHC6 AL451007.2-201ENST00000632004 563 ntBASIC15.15■□□□□ 0.02
CNTNAP2Q9UHC6 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CNTNAP2Q9UHC6 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC15.15■□□□□ 0.02
CNTNAP2Q9UHC6 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC15.15■□□□□ 0.02
CNTNAP2Q9UHC6 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CNTNAP2Q9UHC6 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CNTNAP2Q9UHC6 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
CNTNAP2Q9UHC6 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CNTNAP2Q9UHC6 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CNTNAP2Q9UHC6 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC15.14■□□□□ 0.01
CNTNAP2Q9UHC6 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CNTNAP2Q9UHC6 AC089987.1-201ENST00000551654 2209 ntBASIC15.14■□□□□ 0.01
CNTNAP2Q9UHC6 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CNTNAP2Q9UHC6 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CNTNAP2Q9UHC6 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC15.14■□□□□ 0.01
CNTNAP2Q9UHC6 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CNTNAP2Q9UHC6 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CNTNAP2Q9UHC6 MAPT-IT1-201ENST00000624111 3016 ntBASIC15.14■□□□□ 0.01
CNTNAP2Q9UHC6 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CNTNAP2Q9UHC6 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CNTNAP2Q9UHC6 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CNTNAP2Q9UHC6 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC15.14■□□□□ 0.01
CNTNAP2Q9UHC6 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CNTNAP2Q9UHC6 AF013593.1-201ENST00000458074 1487 ntBASIC15.14■□□□□ 0.01
CNTNAP2Q9UHC6 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CNTNAP2Q9UHC6 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CNTNAP2Q9UHC6 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CNTNAP2Q9UHC6 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CNTNAP2Q9UHC6 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CNTNAP2Q9UHC6 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CNTNAP2Q9UHC6 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC15.14■□□□□ 0.01
CNTNAP2Q9UHC6 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
CNTNAP2Q9UHC6 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CNTNAP2Q9UHC6 AC106827.1-201ENST00000366454 431 ntBASIC15.14■□□□□ 0.01
CNTNAP2Q9UHC6 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CNTNAP2Q9UHC6 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
CNTNAP2Q9UHC6 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
CNTNAP2Q9UHC6 STK16-203ENST00000409516 895 ntTSL 2 BASIC15.14■□□□□ 0.01
CNTNAP2Q9UHC6 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CNTNAP2Q9UHC6 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC15.14■□□□□ 0.01
CNTNAP2Q9UHC6 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC15.14■□□□□ 0.01
CNTNAP2Q9UHC6 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CNTNAP2Q9UHC6 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC15.14■□□□□ 0.01
CNTNAP2Q9UHC6 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC15.14■□□□□ 0.01
CNTNAP2Q9UHC6 OR2A1-AS1-210ENST00000496968 531 ntBASIC15.14■□□□□ 0.01
CNTNAP2Q9UHC6 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC15.14■□□□□ 0.01
CNTNAP2Q9UHC6 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC15.14■□□□□ 0.01
CNTNAP2Q9UHC6 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC15.14■□□□□ 0.01
CNTNAP2Q9UHC6 MIR3940-201ENST00000579148 102 ntBASIC15.14■□□□□ 0.01
CNTNAP2Q9UHC6 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CNTNAP2Q9UHC6 AC127024.7-201ENST00000625101 200 ntBASIC15.14■□□□□ 0.01
CNTNAP2Q9UHC6 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CNTNAP2Q9UHC6 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CNTNAP2Q9UHC6 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC15.13■□□□□ 0.01
CNTNAP2Q9UHC6 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC15.13■□□□□ 0.01
CNTNAP2Q9UHC6 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CNTNAP2Q9UHC6 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CNTNAP2Q9UHC6 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CNTNAP2Q9UHC6 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC15.13■□□□□ 0.01
CNTNAP2Q9UHC6 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC15.13■□□□□ 0.01
CNTNAP2Q9UHC6 NCLP1-201ENST00000445357 1963 ntBASIC15.13■□□□□ 0.01
CNTNAP2Q9UHC6 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC15.13■□□□□ 0.01
CNTNAP2Q9UHC6 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC15.13■□□□□ 0.01
CNTNAP2Q9UHC6 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC15.13■□□□□ 0.01
CNTNAP2Q9UHC6 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CNTNAP2Q9UHC6 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CNTNAP2Q9UHC6 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CNTNAP2Q9UHC6 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CNTNAP2Q9UHC6 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CNTNAP2Q9UHC6 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC15.13■□□□□ 0.01
CNTNAP2Q9UHC6 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC15.13■□□□□ 0.01
CNTNAP2Q9UHC6 AC067750.1-201ENST00000608826 6545 ntBASIC15.13■□□□□ 0.01
CNTNAP2Q9UHC6 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CNTNAP2Q9UHC6 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CNTNAP2Q9UHC6 ABCD1P4-201ENST00000399687 604 ntBASIC15.13■□□□□ 0.01
CNTNAP2Q9UHC6 SNORA50C-201ENST00000408535 133 ntBASIC15.13■□□□□ 0.01
CNTNAP2Q9UHC6 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC15.13■□□□□ 0.01
CNTNAP2Q9UHC6 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CNTNAP2Q9UHC6 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CNTNAP2Q9UHC6 COX5A-205ENST00000568517 582 ntTSL 3 BASIC15.13■□□□□ 0.01
CNTNAP2Q9UHC6 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC15.13■□□□□ 0.01
CNTNAP2Q9UHC6 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC15.13■□□□□ 0.01
CNTNAP2Q9UHC6 RN7SL556P-201ENST00000582856 298 ntBASIC15.13■□□□□ 0.01
CNTNAP2Q9UHC6 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms