Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
HDAC6Q9UBN7 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HDAC6Q9UBN7 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
HDAC6Q9UBN7 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC15.79■□□□□ 0.12
HDAC6Q9UBN7 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC15.79■□□□□ 0.12
HDAC6Q9UBN7 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
HDAC6Q9UBN7 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HDAC6Q9UBN7 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HDAC6Q9UBN7 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
HDAC6Q9UBN7 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
HDAC6Q9UBN7 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
HDAC6Q9UBN7 LINC00115-201ENST00000473798 1317 ntBASIC15.79■□□□□ 0.12
HDAC6Q9UBN7 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
HDAC6Q9UBN7 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HDAC6Q9UBN7 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HDAC6Q9UBN7 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
HDAC6Q9UBN7 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC15.79■□□□□ 0.12
HDAC6Q9UBN7 REEP5-205ENST00000504247 480 ntTSL 5 BASIC15.79■□□□□ 0.12
HDAC6Q9UBN7 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC15.79■□□□□ 0.12
HDAC6Q9UBN7 AC005740.1-201ENST00000515639 522 ntBASIC15.79■□□□□ 0.12
HDAC6Q9UBN7 RNA5SP406-201ENST00000516106 112 ntBASIC15.79■□□□□ 0.12
HDAC6Q9UBN7 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
HDAC6Q9UBN7 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC15.79■□□□□ 0.12
HDAC6Q9UBN7 C2orf69P1-201ENST00000563532 1093 ntBASIC15.79■□□□□ 0.12
HDAC6Q9UBN7 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC15.79■□□□□ 0.12
HDAC6Q9UBN7 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC15.79■□□□□ 0.12
HDAC6Q9UBN7 AC006158.1-201ENST00000610661 249 ntBASIC15.79■□□□□ 0.12
HDAC6Q9UBN7 AC002044.2-201ENST00000624910 970 ntBASIC15.79■□□□□ 0.12
HDAC6Q9UBN7 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC15.79■□□□□ 0.12
HDAC6Q9UBN7 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HDAC6Q9UBN7 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC15.79■□□□□ 0.12
HDAC6Q9UBN7 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
HDAC6Q9UBN7 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC15.79■□□□□ 0.12
HDAC6Q9UBN7 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
HDAC6Q9UBN7 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HDAC6Q9UBN7 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HDAC6Q9UBN7 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC15.79■□□□□ 0.12
HDAC6Q9UBN7 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC15.79■□□□□ 0.12
HDAC6Q9UBN7 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC15.79■□□□□ 0.12
HDAC6Q9UBN7 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
HDAC6Q9UBN7 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC15.78■□□□□ 0.12
HDAC6Q9UBN7 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
HDAC6Q9UBN7 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HDAC6Q9UBN7 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
HDAC6Q9UBN7 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HDAC6Q9UBN7 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
HDAC6Q9UBN7 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC15.78■□□□□ 0.12
HDAC6Q9UBN7 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
HDAC6Q9UBN7 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
HDAC6Q9UBN7 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
HDAC6Q9UBN7 AL157996.1-201ENST00000624684 2299 ntBASIC15.78■□□□□ 0.12
HDAC6Q9UBN7 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
HDAC6Q9UBN7 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HDAC6Q9UBN7 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC15.78■□□□□ 0.12
HDAC6Q9UBN7 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HDAC6Q9UBN7 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HDAC6Q9UBN7 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HDAC6Q9UBN7 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HDAC6Q9UBN7 STK16-203ENST00000409516 895 ntTSL 2 BASIC15.78■□□□□ 0.12
HDAC6Q9UBN7 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC15.78■□□□□ 0.12
HDAC6Q9UBN7 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC15.78■□□□□ 0.12
HDAC6Q9UBN7 NAA40-205ENST00000539656 577 ntTSL 4 BASIC15.78■□□□□ 0.12
HDAC6Q9UBN7 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC15.78■□□□□ 0.12
HDAC6Q9UBN7 AC141586.1-203ENST00000567242 366 ntBASIC15.78■□□□□ 0.12
HDAC6Q9UBN7 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC15.78■□□□□ 0.12
HDAC6Q9UBN7 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC15.78■□□□□ 0.12
HDAC6Q9UBN7 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC15.78■□□□□ 0.12
HDAC6Q9UBN7 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HDAC6Q9UBN7 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC15.78■□□□□ 0.12
HDAC6Q9UBN7 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HDAC6Q9UBN7 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
HDAC6Q9UBN7 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
HDAC6Q9UBN7 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
HDAC6Q9UBN7 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HDAC6Q9UBN7 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HDAC6Q9UBN7 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HDAC6Q9UBN7 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC15.78■□□□□ 0.12
HDAC6Q9UBN7 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HDAC6Q9UBN7 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
HDAC6Q9UBN7 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
HDAC6Q9UBN7 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
HDAC6Q9UBN7 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HDAC6Q9UBN7 AL365181.3-201ENST00000605886 3222 ntBASIC15.77■□□□□ 0.12
HDAC6Q9UBN7 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
HDAC6Q9UBN7 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC15.77■□□□□ 0.12
HDAC6Q9UBN7 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
HDAC6Q9UBN7 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HDAC6Q9UBN7 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
HDAC6Q9UBN7 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HDAC6Q9UBN7 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
HDAC6Q9UBN7 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC15.77■□□□□ 0.12
HDAC6Q9UBN7 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HDAC6Q9UBN7 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.12
HDAC6Q9UBN7 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HDAC6Q9UBN7 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HDAC6Q9UBN7 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
HDAC6Q9UBN7 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HDAC6Q9UBN7 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HDAC6Q9UBN7 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HDAC6Q9UBN7 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms