Protein–RNA interactions for Protein: Q96DB2

HDAC11, Histone deacetylase 11, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11Q96DB2 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
HDAC11Q96DB2 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
HDAC11Q96DB2 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
HDAC11Q96DB2 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
HDAC11Q96DB2 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
HDAC11Q96DB2 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
HDAC11Q96DB2 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
HDAC11Q96DB2 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HDAC11Q96DB2 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HDAC11Q96DB2 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HDAC11Q96DB2 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HDAC11Q96DB2 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HDAC11Q96DB2 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HDAC11Q96DB2 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC14.4□□□□□ -0.1
HDAC11Q96DB2 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HDAC11Q96DB2 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
HDAC11Q96DB2 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HDAC11Q96DB2 OR2I1P-208ENST00000641137 4948 ntBASIC14.39□□□□□ -0.11
HDAC11Q96DB2 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HDAC11Q96DB2 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
HDAC11Q96DB2 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC14.39□□□□□ -0.11
HDAC11Q96DB2 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HDAC11Q96DB2 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC14.39□□□□□ -0.11
HDAC11Q96DB2 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HDAC11Q96DB2 KRT8P43-201ENST00000406052 1458 ntBASIC14.39□□□□□ -0.11
HDAC11Q96DB2 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
HDAC11Q96DB2 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HDAC11Q96DB2 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
HDAC11Q96DB2 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HDAC11Q96DB2 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HDAC11Q96DB2 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC14.39□□□□□ -0.11
HDAC11Q96DB2 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
HDAC11Q96DB2 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC14.39□□□□□ -0.11
HDAC11Q96DB2 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HDAC11Q96DB2 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HDAC11Q96DB2 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HDAC11Q96DB2 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
HDAC11Q96DB2 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HDAC11Q96DB2 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
HDAC11Q96DB2 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
HDAC11Q96DB2 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HDAC11Q96DB2 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HDAC11Q96DB2 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
HDAC11Q96DB2 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
HDAC11Q96DB2 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HDAC11Q96DB2 ELK2AP-201ENST00000392510 1007 ntBASIC14.39□□□□□ -0.11
HDAC11Q96DB2 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HDAC11Q96DB2 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC14.39□□□□□ -0.11
HDAC11Q96DB2 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC14.39□□□□□ -0.11
HDAC11Q96DB2 PFN2-206ENST00000461930 606 ntTSL 4 BASIC14.39□□□□□ -0.11
HDAC11Q96DB2 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
HDAC11Q96DB2 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC14.39□□□□□ -0.11
HDAC11Q96DB2 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC14.39□□□□□ -0.11
HDAC11Q96DB2 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
HDAC11Q96DB2 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC14.39□□□□□ -0.11
HDAC11Q96DB2 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
HDAC11Q96DB2 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC14.39□□□□□ -0.11
HDAC11Q96DB2 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
HDAC11Q96DB2 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC14.39□□□□□ -0.11
HDAC11Q96DB2 PHBP15-201ENST00000574228 665 ntBASIC14.39□□□□□ -0.11
HDAC11Q96DB2 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
HDAC11Q96DB2 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC14.39□□□□□ -0.11
HDAC11Q96DB2 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC14.39□□□□□ -0.11
HDAC11Q96DB2 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
HDAC11Q96DB2 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC14.39□□□□□ -0.11
HDAC11Q96DB2 MIR6769A-201ENST00000617340 73 ntBASIC14.39□□□□□ -0.11
HDAC11Q96DB2 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC14.39□□□□□ -0.11
HDAC11Q96DB2 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HDAC11Q96DB2 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HDAC11Q96DB2 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC14.39□□□□□ -0.11
HDAC11Q96DB2 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HDAC11Q96DB2 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC14.39□□□□□ -0.11
HDAC11Q96DB2 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
HDAC11Q96DB2 USP31-203ENST00000567975 2142 ntTSL 2 BASIC14.39□□□□□ -0.11
HDAC11Q96DB2 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HDAC11Q96DB2 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC14.39□□□□□ -0.11
HDAC11Q96DB2 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HDAC11Q96DB2 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HDAC11Q96DB2 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC14.39□□□□□ -0.11
HDAC11Q96DB2 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
HDAC11Q96DB2 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HDAC11Q96DB2 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HDAC11Q96DB2 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC14.39□□□□□ -0.11
HDAC11Q96DB2 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HDAC11Q96DB2 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HDAC11Q96DB2 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HDAC11Q96DB2 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
HDAC11Q96DB2 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
HDAC11Q96DB2 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC14.38□□□□□ -0.11
HDAC11Q96DB2 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC14.38□□□□□ -0.11
HDAC11Q96DB2 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
HDAC11Q96DB2 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
HDAC11Q96DB2 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC14.38□□□□□ -0.11
HDAC11Q96DB2 PTPRVP-205ENST00000641549 5067 ntBASIC14.38□□□□□ -0.11
HDAC11Q96DB2 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
HDAC11Q96DB2 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HDAC11Q96DB2 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
HDAC11Q96DB2 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
HDAC11Q96DB2 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
HDAC11Q96DB2 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms