Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AC046143.1-201ENST00000447139 972 ntTSL 2 BASIC8.95□□□□□ -0.98
ALMS1Q8TCU4 AC118758.1-201ENST00000448242 564 ntTSL 4 BASIC8.95□□□□□ -0.98
ALMS1Q8TCU4 AC093627.3-201ENST00000467050 574 ntTSL 4 BASIC8.95□□□□□ -0.98
ALMS1Q8TCU4 AP001505.1-201ENST00000569966 824 ntBASIC8.95□□□□□ -0.98
ALMS1Q8TCU4 PTMAP5-202ENST00000607242 1162 ntBASIC8.95□□□□□ -0.98
ALMS1Q8TCU4 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC8.95□□□□□ -0.98
ALMS1Q8TCU4 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC8.95□□□□□ -0.98
ALMS1Q8TCU4 SNU13-201ENST00000215956 1630 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
ALMS1Q8TCU4 CSF2RA-201ENST00000355432 1628 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
ALMS1Q8TCU4 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC8.95□□□□□ -0.98
ALMS1Q8TCU4 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
ALMS1Q8TCU4 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
ALMS1Q8TCU4 AC020914.1-201ENST00000396477 1476 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
ALMS1Q8TCU4 AC020910.6-201ENST00000623084 1459 ntBASIC8.95□□□□□ -0.98
ALMS1Q8TCU4 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
ALMS1Q8TCU4 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
ALMS1Q8TCU4 ST5-258ENST00000534278 1352 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
ALMS1Q8TCU4 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
ALMS1Q8TCU4 PHF10-206ENST00000621772 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
ALMS1Q8TCU4 GRP-201ENST00000256857 848 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
ALMS1Q8TCU4 PDZRN3-AS1-202ENST00000608304 774 ntTSL 5 BASIC8.94□□□□□ -0.98
ALMS1Q8TCU4 AC068134.4-201ENST00000613365 122 ntBASIC8.94□□□□□ -0.98
ALMS1Q8TCU4 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
ALMS1Q8TCU4 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC8.94□□□□□ -0.98
ALMS1Q8TCU4 KIR2DL4-204ENST00000359085 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
ALMS1Q8TCU4 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC8.94□□□□□ -0.98
ALMS1Q8TCU4 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
ALMS1Q8TCU4 AC012485.1-201ENST00000456601 2509 ntTSL 2 BASIC8.94□□□□□ -0.98
ALMS1Q8TCU4 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC8.94□□□□□ -0.98
ALMS1Q8TCU4 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
ALMS1Q8TCU4 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
ALMS1Q8TCU4 KIR3DL3-201ENST00000291860 1691 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
ALMS1Q8TCU4 BSCL2-203ENST00000360796 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
ALMS1Q8TCU4 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
ALMS1Q8TCU4 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
ALMS1Q8TCU4 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
ALMS1Q8TCU4 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
ALMS1Q8TCU4 FAM96A-201ENST00000300030 1105 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
ALMS1Q8TCU4 SYCE1-201ENST00000303903 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
ALMS1Q8TCU4 OR10K2-201ENST00000314902 939 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
ALMS1Q8TCU4 ATP6AP2-202ENST00000423649 1093 ntAPPRIS ALT2 TSL 2 BASIC8.94□□□□□ -0.98
ALMS1Q8TCU4 PLA2G6-213ENST00000447598 567 ntTSL 5 BASIC8.94□□□□□ -0.98
ALMS1Q8TCU4 RPSAP5-201ENST00000485258 884 ntBASIC8.94□□□□□ -0.98
ALMS1Q8TCU4 AC022447.2-201ENST00000509750 543 ntTSL 3 BASIC8.94□□□□□ -0.98
ALMS1Q8TCU4 DNM1P17-201ENST00000512082 426 ntBASIC8.94□□□□□ -0.98
ALMS1Q8TCU4 FAM86B1-215ENST00000533513 725 ntTSL 5 BASIC8.94□□□□□ -0.98
ALMS1Q8TCU4 AC013356.4-201ENST00000558421 482 ntTSL 2 BASIC8.94□□□□□ -0.98
ALMS1Q8TCU4 ZNF415-221ENST00000600574 563 ntTSL 3 BASIC8.94□□□□□ -0.98
ALMS1Q8TCU4 RPL37A-212ENST00000600880 425 ntTSL 2 BASIC8.94□□□□□ -0.98
ALMS1Q8TCU4 Metazoa_SRP.97-201ENST00000618280 304 ntBASIC8.94□□□□□ -0.98
ALMS1Q8TCU4 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC8.94□□□□□ -0.98
ALMS1Q8TCU4 PROP1-201ENST00000308304 1464 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
ALMS1Q8TCU4 BARD1-214ENST00000620057 1456 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
ALMS1Q8TCU4 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
ALMS1Q8TCU4 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
ALMS1Q8TCU4 FP671120.1-201ENST00000623664 2498 ntTSL 2 BASIC8.94□□□□□ -0.98
ALMS1Q8TCU4 FP236383.1-201ENST00000623860 2498 ntTSL 2 BASIC8.94□□□□□ -0.98
ALMS1Q8TCU4 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
ALMS1Q8TCU4 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
ALMS1Q8TCU4 CHRNA1-208ENST00000636168 1862 ntTSL 5 BASIC8.94□□□□□ -0.98
ALMS1Q8TCU4 MYADM-204ENST00000391770 3056 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
ALMS1Q8TCU4 NXPE4-201ENST00000375478 1822 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
ALMS1Q8TCU4 IKZF3-211ENST00000394189 1552 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
ALMS1Q8TCU4 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
ALMS1Q8TCU4 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
ALMS1Q8TCU4 FGD5P1-202ENST00000614866 2498 ntBASIC8.94□□□□□ -0.98
ALMS1Q8TCU4 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
ALMS1Q8TCU4 PAGE4-202ENST00000376141 487 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
ALMS1Q8TCU4 AC016304.1-201ENST00000476363 413 ntBASIC8.94□□□□□ -0.98
ALMS1Q8TCU4 RN7SL624P-201ENST00000580297 278 ntBASIC8.94□□□□□ -0.98
ALMS1Q8TCU4 AFMID-205ENST00000586731 550 ntTSL 3 BASIC8.94□□□□□ -0.98
ALMS1Q8TCU4 AC117500.5-201ENST00000623233 527 ntBASIC8.94□□□□□ -0.98
ALMS1Q8TCU4 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC8.94□□□□□ -0.98
ALMS1Q8TCU4 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
ALMS1Q8TCU4 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC8.94□□□□□ -0.98
ALMS1Q8TCU4 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
ALMS1Q8TCU4 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC8.94□□□□□ -0.98
ALMS1Q8TCU4 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
ALMS1Q8TCU4 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC8.94□□□□□ -0.98
ALMS1Q8TCU4 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC8.94□□□□□ -0.98
ALMS1Q8TCU4 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
ALMS1Q8TCU4 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC8.94□□□□□ -0.98
ALMS1Q8TCU4 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
ALMS1Q8TCU4 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
ALMS1Q8TCU4 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC8.94□□□□□ -0.98
ALMS1Q8TCU4 CYP4F12-201ENST00000324632 1687 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
ALMS1Q8TCU4 OBP2A-203ENST00000371776 689 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
ALMS1Q8TCU4 KRTAP10-10-201ENST00000380095 1100 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
ALMS1Q8TCU4 MIR602-201ENST00000384960 98 ntBASIC8.94□□□□□ -0.98
ALMS1Q8TCU4 AL356583.3-201ENST00000412354 417 ntBASIC8.94□□□□□ -0.98
ALMS1Q8TCU4 AL359094.2-201ENST00000420941 750 ntTSL 3 BASIC8.94□□□□□ -0.98
ALMS1Q8TCU4 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
ALMS1Q8TCU4 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
ALMS1Q8TCU4 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
ALMS1Q8TCU4 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
ALMS1Q8TCU4 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
ALMS1Q8TCU4 KRT18P40-201ENST00000599859 1571 ntBASIC8.93□□□□□ -0.98
ALMS1Q8TCU4 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
ALMS1Q8TCU4 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC8.93□□□□□ -0.98
ALMS1Q8TCU4 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms