Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC12.12□□□□□ -0.47
BEST4Q8NFU0 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC12.12□□□□□ -0.47
BEST4Q8NFU0 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC12.12□□□□□ -0.47
BEST4Q8NFU0 WDR88-203ENST00000592765 651 ntTSL 5 BASIC12.12□□□□□ -0.47
BEST4Q8NFU0 LAMTOR5-AS1-209ENST00000597455 805 ntBASIC12.12□□□□□ -0.47
BEST4Q8NFU0 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC12.12□□□□□ -0.47
BEST4Q8NFU0 AC145423.3-201ENST00000615987 467 ntBASIC12.12□□□□□ -0.47
BEST4Q8NFU0 AC002472.3-201ENST00000640124 621 ntBASIC12.12□□□□□ -0.47
BEST4Q8NFU0 DPP3-211ENST00000532677 3078 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
BEST4Q8NFU0 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
BEST4Q8NFU0 AL391825.1-201ENST00000457671 1364 ntBASIC12.12□□□□□ -0.47
BEST4Q8NFU0 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
BEST4Q8NFU0 ELN-216ENST00000429192 3298 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
BEST4Q8NFU0 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
BEST4Q8NFU0 GALNT15-203ENST00000437509 2416 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
BEST4Q8NFU0 EEF2K-201ENST00000263026 7388 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
BEST4Q8NFU0 MAP7-208ENST00000617204 4536 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
BEST4Q8NFU0 ATF6B-209ENST00000375201 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
BEST4Q8NFU0 ATF6B-210ENST00000375203 2620 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
BEST4Q8NFU0 STARD8-203ENST00000374599 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
BEST4Q8NFU0 GRM8-201ENST00000339582 4057 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
BEST4Q8NFU0 ABLIM2-206ENST00000447017 2902 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
BEST4Q8NFU0 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
BEST4Q8NFU0 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC12.12□□□□□ -0.47
BEST4Q8NFU0 AP2A2-202ENST00000448903 4575 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
BEST4Q8NFU0 RGPD5-203ENST00000393283 3304 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
BEST4Q8NFU0 USP39-207ENST00000450066 2086 ntTSL 2 BASIC12.12□□□□□ -0.47
BEST4Q8NFU0 ZFYVE19-209ENST00000564258 2059 ntTSL 2 BASIC12.12□□□□□ -0.47
BEST4Q8NFU0 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
BEST4Q8NFU0 GUCY1B3-202ENST00000502959 2255 ntTSL 2 BASIC12.12□□□□□ -0.47
BEST4Q8NFU0 PCDHB4-201ENST00000194152 3825 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
BEST4Q8NFU0 NAPB-201ENST00000377026 3837 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
BEST4Q8NFU0 CNTROB-203ENST00000565740 2783 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
BEST4Q8NFU0 WSCD2-201ENST00000332082 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
BEST4Q8NFU0 FRMD1-205ENST00000440994 2857 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
BEST4Q8NFU0 MSH5-204ENST00000375755 3094 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
BEST4Q8NFU0 SEC23B-201ENST00000262544 3176 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
BEST4Q8NFU0 YIPF6-201ENST00000374622 6134 ntTSL 2 BASIC12.12□□□□□ -0.47
BEST4Q8NFU0 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
BEST4Q8NFU0 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
BEST4Q8NFU0 EPN3-201ENST00000268933 4071 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
BEST4Q8NFU0 PRICKLE1-203ENST00000455697 4277 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
BEST4Q8NFU0 SRPK3-208ENST00000489426 4479 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
BEST4Q8NFU0 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
BEST4Q8NFU0 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
BEST4Q8NFU0 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC12.11□□□□□ -0.47
BEST4Q8NFU0 CLPX-201ENST00000300107 4695 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
BEST4Q8NFU0 CCDC92-208ENST00000545135 4883 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
BEST4Q8NFU0 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
BEST4Q8NFU0 ZWILCH-203ENST00000535141 2206 ntTSL 2 BASIC12.11□□□□□ -0.47
BEST4Q8NFU0 ROBO1-213ENST00000618846 7483 ntTSL 5 BASIC12.11□□□□□ -0.47
BEST4Q8NFU0 KDM2B-219ENST00000611216 3434 ntTSL 5 BASIC12.11□□□□□ -0.47
BEST4Q8NFU0 DUSP22-211ENST00000604971 3824 ntTSL 2 BASIC12.11□□□□□ -0.47
BEST4Q8NFU0 KCNAB2-202ENST00000341524 4207 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
BEST4Q8NFU0 REST-208ENST00000619101 7114 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
BEST4Q8NFU0 MEF2D-204ENST00000464356 5598 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
BEST4Q8NFU0 HYOU1-221ENST00000621959 3358 ntTSL 2 BASIC12.11□□□□□ -0.47
BEST4Q8NFU0 CHGB-201ENST00000378961 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
BEST4Q8NFU0 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC12.11□□□□□ -0.47
BEST4Q8NFU0 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
BEST4Q8NFU0 PPT1-204ENST00000439754 2195 ntTSL 3 BASIC12.11□□□□□ -0.47
BEST4Q8NFU0 AL031432.4-201ENST00000641729 2190 ntBASIC12.11□□□□□ -0.47
BEST4Q8NFU0 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
BEST4Q8NFU0 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC12.11□□□□□ -0.47
BEST4Q8NFU0 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
BEST4Q8NFU0 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
BEST4Q8NFU0 TDG-209ENST00000544861 1387 ntTSL 2 BASIC12.11□□□□□ -0.47
BEST4Q8NFU0 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
BEST4Q8NFU0 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
BEST4Q8NFU0 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
BEST4Q8NFU0 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
BEST4Q8NFU0 METTL21AP1-201ENST00000438852 635 ntBASIC12.11□□□□□ -0.47
BEST4Q8NFU0 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC12.11□□□□□ -0.47
BEST4Q8NFU0 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
BEST4Q8NFU0 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
BEST4Q8NFU0 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC12.11□□□□□ -0.47
BEST4Q8NFU0 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC12.11□□□□□ -0.47
BEST4Q8NFU0 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
BEST4Q8NFU0 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
BEST4Q8NFU0 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC12.11□□□□□ -0.47
BEST4Q8NFU0 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC12.11□□□□□ -0.47
BEST4Q8NFU0 AP001160.2-201ENST00000596071 487 ntBASIC12.11□□□□□ -0.47
BEST4Q8NFU0 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
BEST4Q8NFU0 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC12.11□□□□□ -0.47
BEST4Q8NFU0 AC093512.1-201ENST00000617969 520 ntBASIC12.11□□□□□ -0.47
BEST4Q8NFU0 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC12.11□□□□□ -0.47
BEST4Q8NFU0 UMODL1-205ENST00000408910 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
BEST4Q8NFU0 RALGPS1-201ENST00000259351 6336 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
BEST4Q8NFU0 FAM105A-201ENST00000274217 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
BEST4Q8NFU0 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC12.11□□□□□ -0.47
BEST4Q8NFU0 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
BEST4Q8NFU0 PI4KB-201ENST00000368872 3331 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
BEST4Q8NFU0 ZNF573-204ENST00000392138 2266 ntTSL 2 BASIC12.11□□□□□ -0.47
BEST4Q8NFU0 ANKRD49-210ENST00000544612 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
BEST4Q8NFU0 ARID4A-202ENST00000355431 5891 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
BEST4Q8NFU0 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC12.11□□□□□ -0.47
BEST4Q8NFU0 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
BEST4Q8NFU0 TRPM2-203ENST00000397928 6221 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
BEST4Q8NFU0 CXCL5-201ENST00000296027 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
BEST4Q8NFU0 SLC45A2-201ENST00000296589 1772 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms