Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNF135Q8IUD6 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC14.84□□□□□ -0.03
RNF135Q8IUD6 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNF135Q8IUD6 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNF135Q8IUD6 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RNF135Q8IUD6 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
RNF135Q8IUD6 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNF135Q8IUD6 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNF135Q8IUD6 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNF135Q8IUD6 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
RNF135Q8IUD6 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC14.84□□□□□ -0.03
RNF135Q8IUD6 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.84□□□□□ -0.03
RNF135Q8IUD6 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNF135Q8IUD6 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNF135Q8IUD6 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNF135Q8IUD6 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.84□□□□□ -0.03
RNF135Q8IUD6 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNF135Q8IUD6 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNF135Q8IUD6 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNF135Q8IUD6 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNF135Q8IUD6 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
RNF135Q8IUD6 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNF135Q8IUD6 PLA2G2A-202ENST00000400520 974 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNF135Q8IUD6 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC14.84□□□□□ -0.03
RNF135Q8IUD6 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC14.84□□□□□ -0.03
RNF135Q8IUD6 EIF5A2-205ENST00000487522 565 ntTSL 3 BASIC14.84□□□□□ -0.03
RNF135Q8IUD6 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC14.84□□□□□ -0.03
RNF135Q8IUD6 OR2A1-AS1-210ENST00000496968 531 ntBASIC14.84□□□□□ -0.03
RNF135Q8IUD6 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC14.84□□□□□ -0.03
RNF135Q8IUD6 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC14.84□□□□□ -0.03
RNF135Q8IUD6 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNF135Q8IUD6 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC14.84□□□□□ -0.03
RNF135Q8IUD6 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC14.84□□□□□ -0.03
RNF135Q8IUD6 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC14.84□□□□□ -0.03
RNF135Q8IUD6 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC14.84□□□□□ -0.03
RNF135Q8IUD6 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC14.84□□□□□ -0.03
RNF135Q8IUD6 MED11-202ENST00000573708 802 ntTSL 2 BASIC14.84□□□□□ -0.03
RNF135Q8IUD6 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC14.84□□□□□ -0.03
RNF135Q8IUD6 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC14.84□□□□□ -0.03
RNF135Q8IUD6 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC14.84□□□□□ -0.03
RNF135Q8IUD6 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC14.84□□□□□ -0.03
RNF135Q8IUD6 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC14.84□□□□□ -0.03
RNF135Q8IUD6 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RNF135Q8IUD6 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNF135Q8IUD6 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNF135Q8IUD6 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.84□□□□□ -0.03
RNF135Q8IUD6 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RNF135Q8IUD6 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC14.84□□□□□ -0.03
RNF135Q8IUD6 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC14.84□□□□□ -0.03
RNF135Q8IUD6 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNF135Q8IUD6 PEG13-201ENST00000631594 5667 ntBASIC14.84□□□□□ -0.03
RNF135Q8IUD6 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RNF135Q8IUD6 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNF135Q8IUD6 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC14.84□□□□□ -0.03
RNF135Q8IUD6 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
RNF135Q8IUD6 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.84□□□□□ -0.03
RNF135Q8IUD6 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC14.84□□□□□ -0.03
RNF135Q8IUD6 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNF135Q8IUD6 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.84□□□□□ -0.03
RNF135Q8IUD6 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RNF135Q8IUD6 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.84□□□□□ -0.03
RNF135Q8IUD6 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RNF135Q8IUD6 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RNF135Q8IUD6 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
RNF135Q8IUD6 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RNF135Q8IUD6 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
RNF135Q8IUD6 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RNF135Q8IUD6 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
RNF135Q8IUD6 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RNF135Q8IUD6 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RNF135Q8IUD6 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
RNF135Q8IUD6 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RNF135Q8IUD6 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC14.83□□□□□ -0.04
RNF135Q8IUD6 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
RNF135Q8IUD6 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RNF135Q8IUD6 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RNF135Q8IUD6 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RNF135Q8IUD6 RNVU1-8-201ENST00000364272 125 ntBASIC14.83□□□□□ -0.04
RNF135Q8IUD6 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RNF135Q8IUD6 TPT1P11-201ENST00000458482 498 ntBASIC14.83□□□□□ -0.04
RNF135Q8IUD6 RN7SL288P-201ENST00000490496 291 ntBASIC14.83□□□□□ -0.04
RNF135Q8IUD6 CHCHD2P2-201ENST00000503744 321 ntBASIC14.83□□□□□ -0.04
RNF135Q8IUD6 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC14.83□□□□□ -0.04
RNF135Q8IUD6 CHTF8-207ENST00000520529 475 ntTSL 2 BASIC14.83□□□□□ -0.04
RNF135Q8IUD6 IGHVIII-5-2-201ENST00000522505 261 ntBASIC14.83□□□□□ -0.04
RNF135Q8IUD6 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC14.83□□□□□ -0.04
RNF135Q8IUD6 AL590235.1-201ENST00000564650 861 ntBASIC14.83□□□□□ -0.04
RNF135Q8IUD6 KRT17P4-206ENST00000584151 719 ntTSL 4 BASIC14.83□□□□□ -0.04
RNF135Q8IUD6 AC008686.1-203ENST00000591826 463 ntTSL 2 BASIC14.83□□□□□ -0.04
RNF135Q8IUD6 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC14.83□□□□□ -0.04
RNF135Q8IUD6 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC14.83□□□□□ -0.04
RNF135Q8IUD6 AP000769.1-203ENST00000637245 208 ntBASIC14.83□□□□□ -0.04
RNF135Q8IUD6 AC137936.2-202ENST00000638124 1146 ntTSL 5 BASIC14.83□□□□□ -0.04
RNF135Q8IUD6 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RNF135Q8IUD6 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RNF135Q8IUD6 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RNF135Q8IUD6 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RNF135Q8IUD6 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
RNF135Q8IUD6 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RNF135Q8IUD6 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms