Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC14.06□□□□□ -0.16
LYSMD3Q7Z3D4 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LYSMD3Q7Z3D4 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC14.06□□□□□ -0.16
LYSMD3Q7Z3D4 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LYSMD3Q7Z3D4 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC14.06□□□□□ -0.16
LYSMD3Q7Z3D4 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC14.06□□□□□ -0.16
LYSMD3Q7Z3D4 RPL18AP8-201ENST00000486071 528 ntBASIC14.06□□□□□ -0.16
LYSMD3Q7Z3D4 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC14.06□□□□□ -0.16
LYSMD3Q7Z3D4 AC095040.1-201ENST00000513286 675 ntBASIC14.06□□□□□ -0.16
LYSMD3Q7Z3D4 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
LYSMD3Q7Z3D4 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
LYSMD3Q7Z3D4 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC14.06□□□□□ -0.16
LYSMD3Q7Z3D4 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC14.06□□□□□ -0.16
LYSMD3Q7Z3D4 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC14.06□□□□□ -0.16
LYSMD3Q7Z3D4 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC14.06□□□□□ -0.16
LYSMD3Q7Z3D4 AC009560.1-201ENST00000620208 434 ntBASIC14.06□□□□□ -0.16
LYSMD3Q7Z3D4 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC14.06□□□□□ -0.16
LYSMD3Q7Z3D4 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LYSMD3Q7Z3D4 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LYSMD3Q7Z3D4 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LYSMD3Q7Z3D4 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
LYSMD3Q7Z3D4 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
LYSMD3Q7Z3D4 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LYSMD3Q7Z3D4 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LYSMD3Q7Z3D4 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC14.06□□□□□ -0.16
LYSMD3Q7Z3D4 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
LYSMD3Q7Z3D4 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
LYSMD3Q7Z3D4 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LYSMD3Q7Z3D4 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
LYSMD3Q7Z3D4 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC14.06□□□□□ -0.16
LYSMD3Q7Z3D4 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
LYSMD3Q7Z3D4 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
LYSMD3Q7Z3D4 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LYSMD3Q7Z3D4 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LYSMD3Q7Z3D4 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC14.06□□□□□ -0.16
LYSMD3Q7Z3D4 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
LYSMD3Q7Z3D4 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
LYSMD3Q7Z3D4 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC14.06□□□□□ -0.16
LYSMD3Q7Z3D4 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LYSMD3Q7Z3D4 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
LYSMD3Q7Z3D4 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
LYSMD3Q7Z3D4 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LYSMD3Q7Z3D4 API5-208ENST00000531273 1868 ntTSL 2 BASIC14.06□□□□□ -0.16
LYSMD3Q7Z3D4 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LYSMD3Q7Z3D4 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
LYSMD3Q7Z3D4 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
LYSMD3Q7Z3D4 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LYSMD3Q7Z3D4 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
LYSMD3Q7Z3D4 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
LYSMD3Q7Z3D4 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LYSMD3Q7Z3D4 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LYSMD3Q7Z3D4 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC14.05□□□□□ -0.16
LYSMD3Q7Z3D4 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
LYSMD3Q7Z3D4 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
LYSMD3Q7Z3D4 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC14.05□□□□□ -0.16
LYSMD3Q7Z3D4 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LYSMD3Q7Z3D4 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LYSMD3Q7Z3D4 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LYSMD3Q7Z3D4 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LYSMD3Q7Z3D4 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC14.05□□□□□ -0.16
LYSMD3Q7Z3D4 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
LYSMD3Q7Z3D4 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
LYSMD3Q7Z3D4 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
LYSMD3Q7Z3D4 AC093462.1-201ENST00000621167 1683 ntBASIC14.05□□□□□ -0.16
LYSMD3Q7Z3D4 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LYSMD3Q7Z3D4 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC14.05□□□□□ -0.16
LYSMD3Q7Z3D4 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
LYSMD3Q7Z3D4 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LYSMD3Q7Z3D4 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
LYSMD3Q7Z3D4 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC14.05□□□□□ -0.16
LYSMD3Q7Z3D4 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC14.05□□□□□ -0.16
LYSMD3Q7Z3D4 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
LYSMD3Q7Z3D4 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LYSMD3Q7Z3D4 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LYSMD3Q7Z3D4 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
LYSMD3Q7Z3D4 PPP1R2P4-201ENST00000424051 595 ntBASIC14.05□□□□□ -0.16
LYSMD3Q7Z3D4 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC14.05□□□□□ -0.16
LYSMD3Q7Z3D4 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
LYSMD3Q7Z3D4 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LYSMD3Q7Z3D4 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC14.05□□□□□ -0.16
LYSMD3Q7Z3D4 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC14.05□□□□□ -0.16
LYSMD3Q7Z3D4 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC14.05□□□□□ -0.16
LYSMD3Q7Z3D4 RN7SL665P-201ENST00000578793 300 ntBASIC14.05□□□□□ -0.16
LYSMD3Q7Z3D4 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC14.05□□□□□ -0.16
LYSMD3Q7Z3D4 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
LYSMD3Q7Z3D4 AC009145.4-201ENST00000625119 1294 ntBASIC14.05□□□□□ -0.16
LYSMD3Q7Z3D4 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC14.05□□□□□ -0.16
LYSMD3Q7Z3D4 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC14.05□□□□□ -0.16
LYSMD3Q7Z3D4 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
LYSMD3Q7Z3D4 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
LYSMD3Q7Z3D4 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC14.05□□□□□ -0.16
LYSMD3Q7Z3D4 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
LYSMD3Q7Z3D4 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC14.05□□□□□ -0.16
LYSMD3Q7Z3D4 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LYSMD3Q7Z3D4 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC14.05□□□□□ -0.16
LYSMD3Q7Z3D4 AC005014.1-201ENST00000432006 2976 ntBASIC14.05□□□□□ -0.16
LYSMD3Q7Z3D4 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC14.05□□□□□ -0.16
LYSMD3Q7Z3D4 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
LYSMD3Q7Z3D4 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LYSMD3Q7Z3D4 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms