Protein–RNA interactions for Protein: Q6RI45

BRWD3, Bromodomain and WD repeat-containing protein 3, humanhuman

Predictions only

Length 1,802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRWD3Q6RI45 LINC00877-202ENST00000464271 552 ntTSL 4 BASIC17.1■□□□□ 0.33
BRWD3Q6RI45 RN7SKP195-201ENST00000516587 303 ntBASIC17.1■□□□□ 0.33
BRWD3Q6RI45 ZFAND1-221ENST00000523096 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BRWD3Q6RI45 AC007622.2-202ENST00000546714 1680 ntTSL 2 BASIC17.1■□□□□ 0.33
BRWD3Q6RI45 ORMDL2-204ENST00000550836 438 ntTSL 3 BASIC17.1■□□□□ 0.33
BRWD3Q6RI45 ADIPOR1P2-201ENST00000554199 820 ntBASIC17.1■□□□□ 0.33
BRWD3Q6RI45 PSME2-213ENST00000560410 755 ntTSL 3 BASIC17.1■□□□□ 0.33
BRWD3Q6RI45 SH3GL1P2-201ENST00000582245 1082 ntBASIC17.1■□□□□ 0.33
BRWD3Q6RI45 KRT8P5-201ENST00000592443 1458 ntBASIC17.1■□□□□ 0.33
BRWD3Q6RI45 GOLGA8IP-202ENST00000611635 2100 ntBASIC17.1■□□□□ 0.33
BRWD3Q6RI45 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
BRWD3Q6RI45 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
BRWD3Q6RI45 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
BRWD3Q6RI45 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BRWD3Q6RI45 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
BRWD3Q6RI45 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
BRWD3Q6RI45 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
BRWD3Q6RI45 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BRWD3Q6RI45 ERGIC3-202ENST00000348547 1359 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BRWD3Q6RI45 MRPL55-212ENST00000366739 641 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
BRWD3Q6RI45 SNORA50C-201ENST00000408535 133 ntBASIC17.1■□□□□ 0.33
BRWD3Q6RI45 AC003101.1-201ENST00000412403 459 ntTSL 3 BASIC17.1■□□□□ 0.33
BRWD3Q6RI45 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC17.1■□□□□ 0.33
BRWD3Q6RI45 SKA1-203ENST00000417656 1095 ntTSL 2 BASIC17.1■□□□□ 0.33
BRWD3Q6RI45 APOBEC3H-203ENST00000421988 592 ntTSL 5 BASIC17.1■□□□□ 0.33
BRWD3Q6RI45 C3orf18-202ENST00000422619 551 ntTSL 4 BASIC17.1■□□□□ 0.33
BRWD3Q6RI45 CMTM1-206ENST00000457188 765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
BRWD3Q6RI45 MIR2110-201ENST00000459421 75 ntBASIC17.1■□□□□ 0.33
BRWD3Q6RI45 PRKRIP1-202ENST00000462601 884 ntTSL 2 BASIC17.1■□□□□ 0.33
BRWD3Q6RI45 ODF3-203ENST00000525282 764 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
BRWD3Q6RI45 CMTM1-215ENST00000531885 590 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
BRWD3Q6RI45 AC091489.1-201ENST00000563866 691 ntTSL 3 BASIC17.1■□□□□ 0.33
BRWD3Q6RI45 SALL1-204ENST00000566102 565 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
BRWD3Q6RI45 AC069366.2-201ENST00000583643 430 ntBASIC17.1■□□□□ 0.33
BRWD3Q6RI45 ZNF544-209ENST00000596929 543 ntTSL 4 BASIC17.1■□□□□ 0.33
BRWD3Q6RI45 GMNN-207ENST00000620958 1039 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
BRWD3Q6RI45 AC021683.4-201ENST00000623348 1099 ntBASIC17.1■□□□□ 0.33
BRWD3Q6RI45 SNORA50.1-201ENST00000628590 135 ntBASIC17.1■□□□□ 0.33
BRWD3Q6RI45 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BRWD3Q6RI45 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
BRWD3Q6RI45 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
BRWD3Q6RI45 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC17.09■□□□□ 0.33
BRWD3Q6RI45 CDCA7L-201ENST00000356195 2915 ntTSL 2 BASIC17.09■□□□□ 0.33
BRWD3Q6RI45 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
BRWD3Q6RI45 AC135506.1-201ENST00000603877 1799 ntBASIC17.09■□□□□ 0.33
BRWD3Q6RI45 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
BRWD3Q6RI45 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
BRWD3Q6RI45 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
BRWD3Q6RI45 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
BRWD3Q6RI45 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
BRWD3Q6RI45 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BRWD3Q6RI45 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
BRWD3Q6RI45 RPUSD4-208ENST00000533628 2053 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
BRWD3Q6RI45 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
BRWD3Q6RI45 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
BRWD3Q6RI45 RNA5SP469-201ENST00000364165 109 ntBASIC17.09■□□□□ 0.33
BRWD3Q6RI45 AL078621.2-201ENST00000419351 698 ntBASIC17.09■□□□□ 0.33
BRWD3Q6RI45 AL365194.1-201ENST00000440032 361 ntTSL 3 BASIC17.09■□□□□ 0.33
BRWD3Q6RI45 AL031773.1-201ENST00000453579 554 ntTSL 3 BASIC17.09■□□□□ 0.33
BRWD3Q6RI45 CLDN16-202ENST00000456423 430 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
BRWD3Q6RI45 OR52P2P-201ENST00000527287 955 ntBASIC17.09■□□□□ 0.33
BRWD3Q6RI45 AC090093.1-201ENST00000611315 271 ntBASIC17.09■□□□□ 0.33
BRWD3Q6RI45 MIR6750-201ENST00000617817 75 ntBASIC17.09■□□□□ 0.33
BRWD3Q6RI45 NOP16-210ENST00000619979 963 ntTSL 5 BASIC17.09■□□□□ 0.33
BRWD3Q6RI45 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC17.09■□□□□ 0.33
BRWD3Q6RI45 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC17.09■□□□□ 0.33
BRWD3Q6RI45 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BRWD3Q6RI45 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.09■□□□□ 0.33
BRWD3Q6RI45 GMPR2-224ENST00000559910 1562 ntTSL 5 BASIC17.09■□□□□ 0.33
BRWD3Q6RI45 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BRWD3Q6RI45 ATF3-202ENST00000341491 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
BRWD3Q6RI45 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
BRWD3Q6RI45 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
BRWD3Q6RI45 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
BRWD3Q6RI45 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
BRWD3Q6RI45 HP-203ENST00000357763 1482 ntTSL 5 BASIC17.08■□□□□ 0.33
BRWD3Q6RI45 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
BRWD3Q6RI45 PXK-210ENST00000479241 2817 ntTSL 2 BASIC17.08■□□□□ 0.33
BRWD3Q6RI45 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
BRWD3Q6RI45 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.33
BRWD3Q6RI45 SERPING1-202ENST00000340687 1719 ntTSL 5 BASIC17.08■□□□□ 0.33
BRWD3Q6RI45 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
BRWD3Q6RI45 MRPL55-207ENST00000366733 834 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
BRWD3Q6RI45 RPS21-202ENST00000370562 1002 ntTSL 2 BASIC17.08■□□□□ 0.33
BRWD3Q6RI45 LST1-205ENST00000376089 680 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
BRWD3Q6RI45 LST1-206ENST00000376090 689 ntTSL 2 BASIC17.08■□□□□ 0.33
BRWD3Q6RI45 LST1-210ENST00000376099 610 ntTSL 2 BASIC17.08■□□□□ 0.33
BRWD3Q6RI45 AL357054.1-201ENST00000407035 1227 ntBASIC17.08■□□□□ 0.33
BRWD3Q6RI45 LST1-214ENST00000418507 726 ntTSL 2 BASIC17.08■□□□□ 0.33
BRWD3Q6RI45 TSEN15P3-201ENST00000422363 367 ntBASIC17.08■□□□□ 0.33
BRWD3Q6RI45 LST1-217ENST00000438075 764 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
BRWD3Q6RI45 RN7SL559P-201ENST00000476501 297 ntBASIC17.08■□□□□ 0.33
BRWD3Q6RI45 AC003072.1-201ENST00000510957 612 ntBASIC17.08■□□□□ 0.33
BRWD3Q6RI45 NT5CP2-201ENST00000553305 561 ntBASIC17.08■□□□□ 0.33
BRWD3Q6RI45 AC116553.1-201ENST00000561752 397 ntBASIC17.08■□□□□ 0.33
BRWD3Q6RI45 ZG16B-204ENST00000572863 716 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
BRWD3Q6RI45 AC010325.1-203ENST00000636757 380 ntAPPRIS P5 TSL 5 BASIC17.08■□□□□ 0.33
BRWD3Q6RI45 AL590556.2-201ENST00000637118 1162 ntTSL 5 BASIC17.08■□□□□ 0.33
BRWD3Q6RI45 DBET-201ENST00000630918 3363 ntBASIC17.08■□□□□ 0.33
BRWD3Q6RI45 HYMAI-201ENST00000635591 3347 ntBASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms