Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 AC103810.10-201ENST00000606504 343 ntBASIC14.58□□□□□ -0.08
TTC39BQ5VTQ0 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC14.58□□□□□ -0.08
TTC39BQ5VTQ0 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC14.58□□□□□ -0.08
TTC39BQ5VTQ0 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC14.58□□□□□ -0.08
TTC39BQ5VTQ0 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC14.58□□□□□ -0.08
TTC39BQ5VTQ0 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TTC39BQ5VTQ0 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC14.58□□□□□ -0.08
TTC39BQ5VTQ0 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TTC39BQ5VTQ0 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC14.58□□□□□ -0.08
TTC39BQ5VTQ0 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
TTC39BQ5VTQ0 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
TTC39BQ5VTQ0 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TTC39BQ5VTQ0 GOLGA8IP-202ENST00000611635 2100 ntBASIC14.57□□□□□ -0.08
TTC39BQ5VTQ0 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TTC39BQ5VTQ0 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TTC39BQ5VTQ0 TP73-207ENST00000378290 1831 ntTSL 2 BASIC14.57□□□□□ -0.08
TTC39BQ5VTQ0 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC14.57□□□□□ -0.08
TTC39BQ5VTQ0 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TTC39BQ5VTQ0 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
TTC39BQ5VTQ0 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TTC39BQ5VTQ0 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC14.57□□□□□ -0.08
TTC39BQ5VTQ0 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
TTC39BQ5VTQ0 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC14.57□□□□□ -0.08
TTC39BQ5VTQ0 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TTC39BQ5VTQ0 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TTC39BQ5VTQ0 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TTC39BQ5VTQ0 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC14.57□□□□□ -0.08
TTC39BQ5VTQ0 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC14.57□□□□□ -0.08
TTC39BQ5VTQ0 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TTC39BQ5VTQ0 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
TTC39BQ5VTQ0 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
TTC39BQ5VTQ0 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TTC39BQ5VTQ0 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
TTC39BQ5VTQ0 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TTC39BQ5VTQ0 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC14.57□□□□□ -0.08
TTC39BQ5VTQ0 AC026316.1-201ENST00000398900 414 ntBASIC14.57□□□□□ -0.08
TTC39BQ5VTQ0 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC14.57□□□□□ -0.08
TTC39BQ5VTQ0 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC14.57□□□□□ -0.08
TTC39BQ5VTQ0 RPL18AP8-201ENST00000486071 528 ntBASIC14.57□□□□□ -0.08
TTC39BQ5VTQ0 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC14.57□□□□□ -0.08
TTC39BQ5VTQ0 AC005740.1-201ENST00000515639 522 ntBASIC14.57□□□□□ -0.08
TTC39BQ5VTQ0 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC14.57□□□□□ -0.08
TTC39BQ5VTQ0 SIGLEC22P-201ENST00000599104 714 ntBASIC14.57□□□□□ -0.08
TTC39BQ5VTQ0 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC14.57□□□□□ -0.08
TTC39BQ5VTQ0 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC14.57□□□□□ -0.08
TTC39BQ5VTQ0 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TTC39BQ5VTQ0 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TTC39BQ5VTQ0 AC092053.3-201ENST00000641308 4975 ntBASIC14.57□□□□□ -0.08
TTC39BQ5VTQ0 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TTC39BQ5VTQ0 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TTC39BQ5VTQ0 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC14.57□□□□□ -0.08
TTC39BQ5VTQ0 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC14.57□□□□□ -0.08
TTC39BQ5VTQ0 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TTC39BQ5VTQ0 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
TTC39BQ5VTQ0 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TTC39BQ5VTQ0 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TTC39BQ5VTQ0 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TTC39BQ5VTQ0 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TTC39BQ5VTQ0 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TTC39BQ5VTQ0 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TTC39BQ5VTQ0 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
TTC39BQ5VTQ0 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
TTC39BQ5VTQ0 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TTC39BQ5VTQ0 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
TTC39BQ5VTQ0 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TTC39BQ5VTQ0 STK3-218ENST00000617590 2485 ntTSL 5 BASIC14.56□□□□□ -0.08
TTC39BQ5VTQ0 AL139158.3-201ENST00000641212 1562 ntBASIC14.56□□□□□ -0.08
TTC39BQ5VTQ0 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
TTC39BQ5VTQ0 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC14.56□□□□□ -0.08
TTC39BQ5VTQ0 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC14.56□□□□□ -0.08
TTC39BQ5VTQ0 AC135782.3-201ENST00000562782 2105 ntBASIC14.56□□□□□ -0.08
TTC39BQ5VTQ0 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TTC39BQ5VTQ0 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TTC39BQ5VTQ0 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TTC39BQ5VTQ0 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC14.56□□□□□ -0.08
TTC39BQ5VTQ0 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TTC39BQ5VTQ0 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC14.56□□□□□ -0.08
TTC39BQ5VTQ0 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TTC39BQ5VTQ0 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TTC39BQ5VTQ0 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC14.56□□□□□ -0.08
TTC39BQ5VTQ0 DNAJB1P1-201ENST00000429417 1024 ntBASIC14.56□□□□□ -0.08
TTC39BQ5VTQ0 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC14.56□□□□□ -0.08
TTC39BQ5VTQ0 CHCHD2P9-201ENST00000461726 456 ntBASIC14.56□□□□□ -0.08
TTC39BQ5VTQ0 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC14.56□□□□□ -0.08
TTC39BQ5VTQ0 PRKXP1-201ENST00000561423 1122 ntBASIC14.56□□□□□ -0.08
TTC39BQ5VTQ0 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC14.56□□□□□ -0.08
TTC39BQ5VTQ0 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC14.56□□□□□ -0.08
TTC39BQ5VTQ0 AC132872.1-201ENST00000566986 1195 ntBASIC14.56□□□□□ -0.08
TTC39BQ5VTQ0 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC14.56□□□□□ -0.08
TTC39BQ5VTQ0 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC14.56□□□□□ -0.08
TTC39BQ5VTQ0 AC103691.2-201ENST00000618824 433 ntBASIC14.56□□□□□ -0.08
TTC39BQ5VTQ0 AC007718.1-201ENST00000621078 280 ntBASIC14.56□□□□□ -0.08
TTC39BQ5VTQ0 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC14.56□□□□□ -0.08
TTC39BQ5VTQ0 AC128714.1-201ENST00000637035 887 ntBASIC14.56□□□□□ -0.08
TTC39BQ5VTQ0 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TTC39BQ5VTQ0 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TTC39BQ5VTQ0 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TTC39BQ5VTQ0 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC14.56□□□□□ -0.08
TTC39BQ5VTQ0 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
TTC39BQ5VTQ0 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms