Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
KDELR3O43731 AC092638.2-201ENST00000441105 947 ntBASIC14.08□□□□□ -0.16
KDELR3O43731 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
KDELR3O43731 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC14.08□□□□□ -0.16
KDELR3O43731 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC14.08□□□□□ -0.16
KDELR3O43731 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
KDELR3O43731 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
KDELR3O43731 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
KDELR3O43731 ZNF493-208ENST00000599461 1769 ntBASIC14.08□□□□□ -0.16
KDELR3O43731 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
KDELR3O43731 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
KDELR3O43731 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.08□□□□□ -0.16
KDELR3O43731 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
KDELR3O43731 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
KDELR3O43731 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
KDELR3O43731 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
KDELR3O43731 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC14.08□□□□□ -0.16
KDELR3O43731 AC135782.3-201ENST00000562782 2105 ntBASIC14.08□□□□□ -0.16
KDELR3O43731 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
KDELR3O43731 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
KDELR3O43731 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
KDELR3O43731 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
KDELR3O43731 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14.07□□□□□ -0.16
KDELR3O43731 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
KDELR3O43731 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
KDELR3O43731 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
KDELR3O43731 LINC00638-201ENST00000555578 2518 ntBASIC14.07□□□□□ -0.16
KDELR3O43731 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
KDELR3O43731 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC14.07□□□□□ -0.16
KDELR3O43731 STK25-235ENST00000543554 2556 ntTSL 2 BASIC14.07□□□□□ -0.16
KDELR3O43731 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
KDELR3O43731 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
KDELR3O43731 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC14.07□□□□□ -0.16
KDELR3O43731 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC14.07□□□□□ -0.16
KDELR3O43731 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
KDELR3O43731 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
KDELR3O43731 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
KDELR3O43731 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
KDELR3O43731 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
KDELR3O43731 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC14.07□□□□□ -0.16
KDELR3O43731 INO80C-202ENST00000334598 974 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
KDELR3O43731 SSR4-202ENST00000370085 526 ntTSL 2 BASIC14.07□□□□□ -0.16
KDELR3O43731 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
KDELR3O43731 RPSAP31-201ENST00000416648 895 ntBASIC14.07□□□□□ -0.16
KDELR3O43731 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC14.07□□□□□ -0.16
KDELR3O43731 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
KDELR3O43731 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC14.07□□□□□ -0.16
KDELR3O43731 KRT18P62-201ENST00000446618 1287 ntBASIC14.07□□□□□ -0.16
KDELR3O43731 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC14.07□□□□□ -0.16
KDELR3O43731 RPS23-204ENST00000507980 836 ntTSL 2 BASIC14.07□□□□□ -0.16
KDELR3O43731 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
KDELR3O43731 NPM1P43-201ENST00000558669 786 ntBASIC14.07□□□□□ -0.16
KDELR3O43731 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC14.07□□□□□ -0.16
KDELR3O43731 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
KDELR3O43731 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC14.07□□□□□ -0.16
KDELR3O43731 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC14.07□□□□□ -0.16
KDELR3O43731 AC073911.3-201ENST00000624401 631 ntBASIC14.07□□□□□ -0.16
KDELR3O43731 ST5-261ENST00000626808 1071 ntTSL 5 BASIC14.07□□□□□ -0.16
KDELR3O43731 HELLS-212ENST00000630929 400 ntTSL 5 BASIC14.07□□□□□ -0.16
KDELR3O43731 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
KDELR3O43731 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
KDELR3O43731 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
KDELR3O43731 AC073548.1-201ENST00000624088 1882 ntBASIC14.07□□□□□ -0.16
KDELR3O43731 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
KDELR3O43731 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
KDELR3O43731 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC14.07□□□□□ -0.16
KDELR3O43731 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
KDELR3O43731 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
KDELR3O43731 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC14.07□□□□□ -0.16
KDELR3O43731 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
KDELR3O43731 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC14.07□□□□□ -0.16
KDELR3O43731 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC14.07□□□□□ -0.16
KDELR3O43731 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
KDELR3O43731 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
KDELR3O43731 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC14.07□□□□□ -0.16
KDELR3O43731 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
KDELR3O43731 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
KDELR3O43731 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
KDELR3O43731 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC14.06□□□□□ -0.16
KDELR3O43731 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
KDELR3O43731 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC14.06□□□□□ -0.16
KDELR3O43731 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
KDELR3O43731 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
KDELR3O43731 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
KDELR3O43731 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC14.06□□□□□ -0.16
KDELR3O43731 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
KDELR3O43731 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
KDELR3O43731 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
KDELR3O43731 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
KDELR3O43731 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
KDELR3O43731 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
KDELR3O43731 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
KDELR3O43731 MANEA-AS1-201ENST00000564541 2268 ntBASIC14.06□□□□□ -0.16
KDELR3O43731 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
KDELR3O43731 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC14.06□□□□□ -0.16
KDELR3O43731 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
KDELR3O43731 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
KDELR3O43731 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
KDELR3O43731 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
KDELR3O43731 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms