Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
NPIPA3F8WFD2 AC025271.4-201ENST00000621477 1726 ntBASIC12.76□□□□□ -0.37
NPIPA3F8WFD2 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
NPIPA3F8WFD2 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NPIPA3F8WFD2 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC12.76□□□□□ -0.37
NPIPA3F8WFD2 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
NPIPA3F8WFD2 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NPIPA3F8WFD2 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NPIPA3F8WFD2 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NPIPA3F8WFD2 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC12.76□□□□□ -0.37
NPIPA3F8WFD2 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
NPIPA3F8WFD2 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
NPIPA3F8WFD2 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NPIPA3F8WFD2 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
NPIPA3F8WFD2 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
NPIPA3F8WFD2 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
NPIPA3F8WFD2 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
NPIPA3F8WFD2 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
NPIPA3F8WFD2 AL157996.1-201ENST00000624684 2299 ntBASIC12.76□□□□□ -0.37
NPIPA3F8WFD2 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
NPIPA3F8WFD2 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NPIPA3F8WFD2 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NPIPA3F8WFD2 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
NPIPA3F8WFD2 AC098934.1-203ENST00000442868 1262 ntBASIC12.76□□□□□ -0.37
NPIPA3F8WFD2 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC12.76□□□□□ -0.37
NPIPA3F8WFD2 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC12.76□□□□□ -0.37
NPIPA3F8WFD2 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC12.76□□□□□ -0.37
NPIPA3F8WFD2 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC12.76□□□□□ -0.37
NPIPA3F8WFD2 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC12.76□□□□□ -0.37
NPIPA3F8WFD2 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC12.76□□□□□ -0.37
NPIPA3F8WFD2 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC12.76□□□□□ -0.37
NPIPA3F8WFD2 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC12.76□□□□□ -0.37
NPIPA3F8WFD2 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC12.76□□□□□ -0.37
NPIPA3F8WFD2 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC12.76□□□□□ -0.37
NPIPA3F8WFD2 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NPIPA3F8WFD2 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NPIPA3F8WFD2 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NPIPA3F8WFD2 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
NPIPA3F8WFD2 CYP51A1P3-201ENST00000400072 1428 ntBASIC12.76□□□□□ -0.37
NPIPA3F8WFD2 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NPIPA3F8WFD2 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NPIPA3F8WFD2 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
NPIPA3F8WFD2 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
NPIPA3F8WFD2 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC12.76□□□□□ -0.37
NPIPA3F8WFD2 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NPIPA3F8WFD2 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
NPIPA3F8WFD2 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
NPIPA3F8WFD2 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC12.76□□□□□ -0.37
NPIPA3F8WFD2 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
NPIPA3F8WFD2 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
NPIPA3F8WFD2 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
NPIPA3F8WFD2 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
NPIPA3F8WFD2 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NPIPA3F8WFD2 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
NPIPA3F8WFD2 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NPIPA3F8WFD2 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NPIPA3F8WFD2 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
NPIPA3F8WFD2 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
NPIPA3F8WFD2 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
NPIPA3F8WFD2 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC12.75□□□□□ -0.37
NPIPA3F8WFD2 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
NPIPA3F8WFD2 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NPIPA3F8WFD2 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NPIPA3F8WFD2 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
NPIPA3F8WFD2 PYY2-201ENST00000315776 282 ntBASIC12.75□□□□□ -0.37
NPIPA3F8WFD2 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
NPIPA3F8WFD2 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC12.75□□□□□ -0.37
NPIPA3F8WFD2 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NPIPA3F8WFD2 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NPIPA3F8WFD2 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NPIPA3F8WFD2 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
NPIPA3F8WFD2 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
NPIPA3F8WFD2 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC12.75□□□□□ -0.37
NPIPA3F8WFD2 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
NPIPA3F8WFD2 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC12.75□□□□□ -0.37
NPIPA3F8WFD2 DPY19L2P5-201ENST00000456300 331 ntBASIC12.75□□□□□ -0.37
NPIPA3F8WFD2 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC12.75□□□□□ -0.37
NPIPA3F8WFD2 KRT18P15-201ENST00000458108 1291 ntBASIC12.75□□□□□ -0.37
NPIPA3F8WFD2 SCARNA12-201ENST00000459155 270 ntBASIC12.75□□□□□ -0.37
NPIPA3F8WFD2 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC12.75□□□□□ -0.37
NPIPA3F8WFD2 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
NPIPA3F8WFD2 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC12.75□□□□□ -0.37
NPIPA3F8WFD2 TMCO5B-205ENST00000530020 894 ntBASIC12.75□□□□□ -0.37
NPIPA3F8WFD2 AP000911.2-201ENST00000534330 502 ntBASIC12.75□□□□□ -0.37
NPIPA3F8WFD2 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
NPIPA3F8WFD2 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
NPIPA3F8WFD2 NDUFB10P1-201ENST00000567319 521 ntBASIC12.75□□□□□ -0.37
NPIPA3F8WFD2 AC007952.5-201ENST00000572818 1486 ntBASIC12.75□□□□□ -0.37
NPIPA3F8WFD2 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
NPIPA3F8WFD2 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC12.75□□□□□ -0.37
NPIPA3F8WFD2 MIR2392-201ENST00000584881 84 ntBASIC12.75□□□□□ -0.37
NPIPA3F8WFD2 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC12.75□□□□□ -0.37
NPIPA3F8WFD2 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
NPIPA3F8WFD2 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
NPIPA3F8WFD2 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NPIPA3F8WFD2 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NPIPA3F8WFD2 AC009145.4-201ENST00000625119 1294 ntBASIC12.75□□□□□ -0.37
NPIPA3F8WFD2 FTX-216ENST00000638985 1367 ntTSL 5 BASIC12.75□□□□□ -0.37
NPIPA3F8WFD2 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC12.75□□□□□ -0.37
NPIPA3F8WFD2 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms