Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 AC007326.1-201ENST00000604539 458 ntBASIC12.3□□□□□ -0.44
NPIPB4C9JG80 AC012073.1-201ENST00000606114 1108 ntBASIC12.3□□□□□ -0.44
NPIPB4C9JG80 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC12.3□□□□□ -0.44
NPIPB4C9JG80 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
NPIPB4C9JG80 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NPIPB4C9JG80 PINX1-201ENST00000314787 1545 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
NPIPB4C9JG80 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NPIPB4C9JG80 DKFZP434A062-201ENST00000573103 5021 ntBASIC12.3□□□□□ -0.44
NPIPB4C9JG80 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NPIPB4C9JG80 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NPIPB4C9JG80 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC12.3□□□□□ -0.44
NPIPB4C9JG80 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
NPIPB4C9JG80 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
NPIPB4C9JG80 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NPIPB4C9JG80 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NPIPB4C9JG80 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
NPIPB4C9JG80 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NPIPB4C9JG80 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NPIPB4C9JG80 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NPIPB4C9JG80 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
NPIPB4C9JG80 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC12.3□□□□□ -0.44
NPIPB4C9JG80 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
NPIPB4C9JG80 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NPIPB4C9JG80 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
NPIPB4C9JG80 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
NPIPB4C9JG80 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
NPIPB4C9JG80 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC12.29□□□□□ -0.44
NPIPB4C9JG80 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
NPIPB4C9JG80 UBTF-209ENST00000529383 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
NPIPB4C9JG80 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
NPIPB4C9JG80 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC12.29□□□□□ -0.44
NPIPB4C9JG80 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
NPIPB4C9JG80 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
NPIPB4C9JG80 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
NPIPB4C9JG80 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
NPIPB4C9JG80 CARS-214ENST00000529772 2637 ntTSL 2 BASIC12.29□□□□□ -0.44
NPIPB4C9JG80 RBM4-201ENST00000310092 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
NPIPB4C9JG80 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
NPIPB4C9JG80 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC12.29□□□□□ -0.44
NPIPB4C9JG80 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
NPIPB4C9JG80 AC019294.4-201ENST00000561777 2905 ntBASIC12.29□□□□□ -0.44
NPIPB4C9JG80 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
NPIPB4C9JG80 SLC2A14-205ENST00000535295 1732 ntTSL 2 BASIC12.29□□□□□ -0.44
NPIPB4C9JG80 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
NPIPB4C9JG80 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
NPIPB4C9JG80 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
NPIPB4C9JG80 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
NPIPB4C9JG80 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
NPIPB4C9JG80 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
NPIPB4C9JG80 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
NPIPB4C9JG80 PPP2R2C-204ENST00000506140 1780 ntTSL 2 BASIC12.29□□□□□ -0.44
NPIPB4C9JG80 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC12.29□□□□□ -0.44
NPIPB4C9JG80 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
NPIPB4C9JG80 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC12.29□□□□□ -0.44
NPIPB4C9JG80 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC12.29□□□□□ -0.44
NPIPB4C9JG80 OR2W2P-201ENST00000406313 909 ntBASIC12.29□□□□□ -0.44
NPIPB4C9JG80 RPL3P2-204ENST00000413027 1203 ntBASIC12.29□□□□□ -0.44
NPIPB4C9JG80 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC12.29□□□□□ -0.44
NPIPB4C9JG80 AL512306.1-201ENST00000432698 848 ntBASIC12.29□□□□□ -0.44
NPIPB4C9JG80 AL359979.2-201ENST00000435108 613 ntTSL 3 BASIC12.29□□□□□ -0.44
NPIPB4C9JG80 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC12.29□□□□□ -0.44
NPIPB4C9JG80 AC005077.3-201ENST00000449614 213 ntBASIC12.29□□□□□ -0.44
NPIPB4C9JG80 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC12.29□□□□□ -0.44
NPIPB4C9JG80 AC012618.1-201ENST00000461223 412 ntBASIC12.29□□□□□ -0.44
NPIPB4C9JG80 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC12.29□□□□□ -0.44
NPIPB4C9JG80 RN7SL67P-201ENST00000492147 296 ntBASIC12.29□□□□□ -0.44
NPIPB4C9JG80 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
NPIPB4C9JG80 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC12.29□□□□□ -0.44
NPIPB4C9JG80 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
NPIPB4C9JG80 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC12.29□□□□□ -0.44
NPIPB4C9JG80 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC12.29□□□□□ -0.44
NPIPB4C9JG80 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC12.29□□□□□ -0.44
NPIPB4C9JG80 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC12.29□□□□□ -0.44
NPIPB4C9JG80 MIR3677-201ENST00000578964 60 ntBASIC12.29□□□□□ -0.44
NPIPB4C9JG80 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC12.29□□□□□ -0.44
NPIPB4C9JG80 AP005264.5-201ENST00000590066 467 ntBASIC12.29□□□□□ -0.44
NPIPB4C9JG80 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC12.29□□□□□ -0.44
NPIPB4C9JG80 SIGLEC18P-201ENST00000602271 909 ntBASIC12.29□□□□□ -0.44
NPIPB4C9JG80 LINC00969-321ENST00000629990 806 ntTSL 5 BASIC12.29□□□□□ -0.44
NPIPB4C9JG80 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
NPIPB4C9JG80 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
NPIPB4C9JG80 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC12.29□□□□□ -0.44
NPIPB4C9JG80 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
NPIPB4C9JG80 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
NPIPB4C9JG80 VAPB-202ENST00000395802 1834 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
NPIPB4C9JG80 ADRA1A-210ENST00000519229 1838 ntTSL 5 BASIC12.29□□□□□ -0.44
NPIPB4C9JG80 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
NPIPB4C9JG80 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
NPIPB4C9JG80 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
NPIPB4C9JG80 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC12.29□□□□□ -0.44
NPIPB4C9JG80 DRG2-202ENST00000395726 1897 ntTSL 5 BASIC12.29□□□□□ -0.44
NPIPB4C9JG80 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
NPIPB4C9JG80 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
NPIPB4C9JG80 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
NPIPB4C9JG80 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
NPIPB4C9JG80 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
NPIPB4C9JG80 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
NPIPB4C9JG80 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
NPIPB4C9JG80 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
NPIPB4C9JG80 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms