Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CCDC187A0A096LP49 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCDC187A0A096LP49 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC13.16□□□□□ -0.3
CCDC187A0A096LP49 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCDC187A0A096LP49 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCDC187A0A096LP49 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CCDC187A0A096LP49 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCDC187A0A096LP49 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CCDC187A0A096LP49 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCDC187A0A096LP49 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCDC187A0A096LP49 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC13.16□□□□□ -0.3
CCDC187A0A096LP49 TP73-201ENST00000346387 4854 ntTSL 5 BASIC13.16□□□□□ -0.3
CCDC187A0A096LP49 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCDC187A0A096LP49 OR10N1P-201ENST00000392758 869 ntBASIC13.16□□□□□ -0.3
CCDC187A0A096LP49 GGTLC4P-201ENST00000402176 664 ntBASIC13.16□□□□□ -0.3
CCDC187A0A096LP49 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC13.16□□□□□ -0.3
CCDC187A0A096LP49 AC079250.1-201ENST00000456046 531 ntBASIC13.16□□□□□ -0.3
CCDC187A0A096LP49 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC13.16□□□□□ -0.3
CCDC187A0A096LP49 AP003351.1-201ENST00000522743 668 ntTSL 3 BASIC13.16□□□□□ -0.3
CCDC187A0A096LP49 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC13.16□□□□□ -0.3
CCDC187A0A096LP49 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC13.16□□□□□ -0.3
CCDC187A0A096LP49 FAM187B2P-201ENST00000577135 713 ntBASIC13.16□□□□□ -0.3
CCDC187A0A096LP49 MIR4326-201ENST00000582203 59 ntBASIC13.16□□□□□ -0.3
CCDC187A0A096LP49 AC113385.2-201ENST00000614465 762 ntBASIC13.16□□□□□ -0.3
CCDC187A0A096LP49 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
CCDC187A0A096LP49 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
CCDC187A0A096LP49 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC13.16□□□□□ -0.3
CCDC187A0A096LP49 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCDC187A0A096LP49 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCDC187A0A096LP49 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.16□□□□□ -0.3
CCDC187A0A096LP49 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CCDC187A0A096LP49 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCDC187A0A096LP49 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCDC187A0A096LP49 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
CCDC187A0A096LP49 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.16□□□□□ -0.3
CCDC187A0A096LP49 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC13.16□□□□□ -0.3
CCDC187A0A096LP49 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCDC187A0A096LP49 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
CCDC187A0A096LP49 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCDC187A0A096LP49 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCDC187A0A096LP49 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCDC187A0A096LP49 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCDC187A0A096LP49 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCDC187A0A096LP49 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCDC187A0A096LP49 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCDC187A0A096LP49 AC139749.1-202ENST00000617529 3139 ntBASIC13.15□□□□□ -0.3
CCDC187A0A096LP49 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCDC187A0A096LP49 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCDC187A0A096LP49 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCDC187A0A096LP49 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCDC187A0A096LP49 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCDC187A0A096LP49 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCDC187A0A096LP49 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCDC187A0A096LP49 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
CCDC187A0A096LP49 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCDC187A0A096LP49 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCDC187A0A096LP49 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCDC187A0A096LP49 SUMO4-201ENST00000326669 1066 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
CCDC187A0A096LP49 CRHR1-205ENST00000352855 1146 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CCDC187A0A096LP49 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCDC187A0A096LP49 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC13.15□□□□□ -0.3
CCDC187A0A096LP49 PGAM1P11-201ENST00000416729 680 ntBASIC13.15□□□□□ -0.3
CCDC187A0A096LP49 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
CCDC187A0A096LP49 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC13.15□□□□□ -0.3
CCDC187A0A096LP49 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC13.15□□□□□ -0.3
CCDC187A0A096LP49 AC092612.1-201ENST00000514501 998 ntBASIC13.15□□□□□ -0.3
CCDC187A0A096LP49 C11orf58-207ENST00000525684 575 ntTSL 2 BASIC13.15□□□□□ -0.3
CCDC187A0A096LP49 C11orf58-209ENST00000528634 776 ntTSL 5 BASIC13.15□□□□□ -0.3
CCDC187A0A096LP49 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC13.15□□□□□ -0.3
CCDC187A0A096LP49 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC13.15□□□□□ -0.3
CCDC187A0A096LP49 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC13.15□□□□□ -0.3
CCDC187A0A096LP49 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC13.15□□□□□ -0.3
CCDC187A0A096LP49 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC13.15□□□□□ -0.3
CCDC187A0A096LP49 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC13.15□□□□□ -0.3
CCDC187A0A096LP49 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC13.15□□□□□ -0.3
CCDC187A0A096LP49 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC13.15□□□□□ -0.3
CCDC187A0A096LP49 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC13.15□□□□□ -0.3
CCDC187A0A096LP49 ADH1B-207ENST00000639454 1210 ntTSL 5 BASIC13.15□□□□□ -0.3
CCDC187A0A096LP49 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC13.15□□□□□ -0.3
CCDC187A0A096LP49 AL139424.3-202ENST00000641619 917 ntBASIC13.15□□□□□ -0.3
CCDC187A0A096LP49 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
CCDC187A0A096LP49 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CCDC187A0A096LP49 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
CCDC187A0A096LP49 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCDC187A0A096LP49 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
CCDC187A0A096LP49 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCDC187A0A096LP49 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCDC187A0A096LP49 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.15□□□□□ -0.3
CCDC187A0A096LP49 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCDC187A0A096LP49 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
CCDC187A0A096LP49 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCDC187A0A096LP49 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCDC187A0A096LP49 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCDC187A0A096LP49 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCDC187A0A096LP49 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
CCDC187A0A096LP49 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.15□□□□□ -0.3
CCDC187A0A096LP49 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCDC187A0A096LP49 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC13.15□□□□□ -0.31
CCDC187A0A096LP49 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.15□□□□□ -0.31
CCDC187A0A096LP49 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms