Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 CLTA-206ENST00000466396 695 ntTSL 2 BASIC25.63■■□□□ 1.69
CLIC4Q9Y696 RNF146-205ENST00000477776 762 ntTSL 3 BASIC25.63■■□□□ 1.69
CLIC4Q9Y696 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
CLIC4Q9Y696 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC25.63■■□□□ 1.69
CLIC4Q9Y696 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC25.63■■□□□ 1.69
CLIC4Q9Y696 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CLIC4Q9Y696 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
CLIC4Q9Y696 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
CLIC4Q9Y696 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
CLIC4Q9Y696 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC25.62■■□□□ 1.69
CLIC4Q9Y696 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC25.62■■□□□ 1.69
CLIC4Q9Y696 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
CLIC4Q9Y696 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC25.62■■□□□ 1.69
CLIC4Q9Y696 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CLIC4Q9Y696 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CLIC4Q9Y696 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CLIC4Q9Y696 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
CLIC4Q9Y696 MIR6722-201ENST00000617286 78 ntBASIC25.61■■□□□ 1.69
CLIC4Q9Y696 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
CLIC4Q9Y696 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC25.61■■□□□ 1.69
CLIC4Q9Y696 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC25.61■■□□□ 1.69
CLIC4Q9Y696 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
CLIC4Q9Y696 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC25.61■■□□□ 1.69
CLIC4Q9Y696 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC25.6■■□□□ 1.69
CLIC4Q9Y696 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC25.6■■□□□ 1.69
CLIC4Q9Y696 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CLIC4Q9Y696 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
CLIC4Q9Y696 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CLIC4Q9Y696 EP400NL-214ENST00000641289 2402 ntBASIC25.6■■□□□ 1.69
CLIC4Q9Y696 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC25.6■■□□□ 1.69
CLIC4Q9Y696 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC25.59■■□□□ 1.69
CLIC4Q9Y696 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
CLIC4Q9Y696 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
CLIC4Q9Y696 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CLIC4Q9Y696 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CLIC4Q9Y696 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC25.59■■□□□ 1.69
CLIC4Q9Y696 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
CLIC4Q9Y696 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC25.58■■□□□ 1.69
CLIC4Q9Y696 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC25.58■■□□□ 1.69
CLIC4Q9Y696 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC25.58■■□□□ 1.69
CLIC4Q9Y696 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CLIC4Q9Y696 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CLIC4Q9Y696 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC25.58■■□□□ 1.69
CLIC4Q9Y696 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC25.58■■□□□ 1.69
CLIC4Q9Y696 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC25.58■■□□□ 1.68
CLIC4Q9Y696 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CLIC4Q9Y696 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC25.57■■□□□ 1.68
CLIC4Q9Y696 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
CLIC4Q9Y696 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CLIC4Q9Y696 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CLIC4Q9Y696 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
CLIC4Q9Y696 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC25.57■■□□□ 1.68
CLIC4Q9Y696 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CLIC4Q9Y696 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CLIC4Q9Y696 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CLIC4Q9Y696 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC25.57■■□□□ 1.68
CLIC4Q9Y696 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC25.57■■□□□ 1.68
CLIC4Q9Y696 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC25.57■■□□□ 1.68
CLIC4Q9Y696 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CLIC4Q9Y696 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
CLIC4Q9Y696 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
CLIC4Q9Y696 AC092028.1-203ENST00000608262 953 ntBASIC25.56■■□□□ 1.68
CLIC4Q9Y696 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC25.56■■□□□ 1.68
CLIC4Q9Y696 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CLIC4Q9Y696 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
CLIC4Q9Y696 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
CLIC4Q9Y696 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC25.55■■□□□ 1.68
CLIC4Q9Y696 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC25.55■■□□□ 1.68
CLIC4Q9Y696 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CLIC4Q9Y696 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC25.55■■□□□ 1.68
CLIC4Q9Y696 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC25.55■■□□□ 1.68
CLIC4Q9Y696 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CLIC4Q9Y696 AC005703.6-201ENST00000623265 1329 ntBASIC25.55■■□□□ 1.68
CLIC4Q9Y696 AC144652.1-201ENST00000609974 1624 ntBASIC25.55■■□□□ 1.68
CLIC4Q9Y696 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
CLIC4Q9Y696 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CLIC4Q9Y696 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
CLIC4Q9Y696 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
CLIC4Q9Y696 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC25.53■■□□□ 1.68
CLIC4Q9Y696 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
CLIC4Q9Y696 GUSBP5-202ENST00000510805 1989 ntBASIC25.53■■□□□ 1.68
CLIC4Q9Y696 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CLIC4Q9Y696 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CLIC4Q9Y696 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC25.53■■□□□ 1.68
CLIC4Q9Y696 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC25.53■■□□□ 1.68
CLIC4Q9Y696 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC25.53■■□□□ 1.68
CLIC4Q9Y696 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
CLIC4Q9Y696 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC25.53■■□□□ 1.68
CLIC4Q9Y696 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC25.53■■□□□ 1.68
CLIC4Q9Y696 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
CLIC4Q9Y696 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CLIC4Q9Y696 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC25.52■■□□□ 1.68
CLIC4Q9Y696 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CLIC4Q9Y696 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC25.52■■□□□ 1.68
CLIC4Q9Y696 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC25.52■■□□□ 1.68
CLIC4Q9Y696 Z92544.1-202ENST00000571933 1220 ntBASIC25.52■■□□□ 1.68
CLIC4Q9Y696 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
CLIC4Q9Y696 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC25.52■■□□□ 1.68
CLIC4Q9Y696 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CLIC4Q9Y696 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms