Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.52■■□□□ 1.04
PCDHGA6Q9Y5G7 MIR939-201ENST00000401314 82 ntBASIC21.52■■□□□ 1.04
PCDHGA6Q9Y5G7 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.52■■□□□ 1.04
PCDHGA6Q9Y5G7 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.52■■□□□ 1.04
PCDHGA6Q9Y5G7 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC21.52■■□□□ 1.04
PCDHGA6Q9Y5G7 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
PCDHGA6Q9Y5G7 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.52■■□□□ 1.03
PCDHGA6Q9Y5G7 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
PCDHGA6Q9Y5G7 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
PCDHGA6Q9Y5G7 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.51■■□□□ 1.03
PCDHGA6Q9Y5G7 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHGA6Q9Y5G7 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHGA6Q9Y5G7 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.51■■□□□ 1.03
PCDHGA6Q9Y5G7 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.51■■□□□ 1.03
PCDHGA6Q9Y5G7 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.51■■□□□ 1.03
PCDHGA6Q9Y5G7 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHGA6Q9Y5G7 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHGA6Q9Y5G7 AL022069.1-201ENST00000568025 1636 ntBASIC21.51■■□□□ 1.03
PCDHGA6Q9Y5G7 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHGA6Q9Y5G7 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.5■■□□□ 1.03
PCDHGA6Q9Y5G7 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.5■■□□□ 1.03
PCDHGA6Q9Y5G7 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHGA6Q9Y5G7 AC026271.2-201ENST00000428091 497 ntBASIC21.5■■□□□ 1.03
PCDHGA6Q9Y5G7 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.5■■□□□ 1.03
PCDHGA6Q9Y5G7 AP001330.3-201ENST00000520123 633 ntBASIC21.5■■□□□ 1.03
PCDHGA6Q9Y5G7 AF213884.3-201ENST00000563833 479 ntBASIC21.5■■□□□ 1.03
PCDHGA6Q9Y5G7 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.5■■□□□ 1.03
PCDHGA6Q9Y5G7 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.5■■□□□ 1.03
PCDHGA6Q9Y5G7 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.5■■□□□ 1.03
PCDHGA6Q9Y5G7 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.5■■□□□ 1.03
PCDHGA6Q9Y5G7 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
PCDHGA6Q9Y5G7 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHGA6Q9Y5G7 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
PCDHGA6Q9Y5G7 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHGA6Q9Y5G7 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHGA6Q9Y5G7 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.49■■□□□ 1.03
PCDHGA6Q9Y5G7 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.49■■□□□ 1.03
PCDHGA6Q9Y5G7 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHGA6Q9Y5G7 AL138724.1-201ENST00000606771 1088 ntBASIC21.49■■□□□ 1.03
PCDHGA6Q9Y5G7 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHGA6Q9Y5G7 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHGA6Q9Y5G7 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHGA6Q9Y5G7 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.48■■□□□ 1.03
PCDHGA6Q9Y5G7 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.48■■□□□ 1.03
PCDHGA6Q9Y5G7 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHGA6Q9Y5G7 ABCB10P4-201ENST00000566803 2184 ntBASIC21.48■■□□□ 1.03
PCDHGA6Q9Y5G7 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHGA6Q9Y5G7 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
PCDHGA6Q9Y5G7 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHGA6Q9Y5G7 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHGA6Q9Y5G7 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.48■■□□□ 1.03
PCDHGA6Q9Y5G7 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.48■■□□□ 1.03
PCDHGA6Q9Y5G7 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHGA6Q9Y5G7 AC105265.2-201ENST00000467189 838 ntBASIC21.48■■□□□ 1.03
PCDHGA6Q9Y5G7 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHGA6Q9Y5G7 AC091305.1-201ENST00000479476 895 ntBASIC21.48■■□□□ 1.03
PCDHGA6Q9Y5G7 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHGA6Q9Y5G7 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.48■■□□□ 1.03
PCDHGA6Q9Y5G7 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHGA6Q9Y5G7 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHGA6Q9Y5G7 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHGA6Q9Y5G7 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
PCDHGA6Q9Y5G7 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHGA6Q9Y5G7 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHGA6Q9Y5G7 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
PCDHGA6Q9Y5G7 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.47■■□□□ 1.03
PCDHGA6Q9Y5G7 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.47■■□□□ 1.03
PCDHGA6Q9Y5G7 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
PCDHGA6Q9Y5G7 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.47■■□□□ 1.03
PCDHGA6Q9Y5G7 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.46■■□□□ 1.03
PCDHGA6Q9Y5G7 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHGA6Q9Y5G7 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHGA6Q9Y5G7 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHGA6Q9Y5G7 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
PCDHGA6Q9Y5G7 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHGA6Q9Y5G7 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.46■■□□□ 1.03
PCDHGA6Q9Y5G7 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.46■■□□□ 1.03
PCDHGA6Q9Y5G7 MIR4767-201ENST00000582827 78 ntBASIC21.46■■□□□ 1.03
PCDHGA6Q9Y5G7 AC011298.3-201ENST00000615796 283 ntBASIC21.46■■□□□ 1.03
PCDHGA6Q9Y5G7 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHGA6Q9Y5G7 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHGA6Q9Y5G7 AC009102.2-201ENST00000606772 1639 ntBASIC21.45■■□□□ 1.02
PCDHGA6Q9Y5G7 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
PCDHGA6Q9Y5G7 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHGA6Q9Y5G7 SERBP1P1-201ENST00000396021 1160 ntBASIC21.45■■□□□ 1.02
PCDHGA6Q9Y5G7 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.45■■□□□ 1.02
PCDHGA6Q9Y5G7 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHGA6Q9Y5G7 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.45■■□□□ 1.02
PCDHGA6Q9Y5G7 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHGA6Q9Y5G7 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.45■■□□□ 1.02
PCDHGA6Q9Y5G7 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHGA6Q9Y5G7 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHGA6Q9Y5G7 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.44■■□□□ 1.02
PCDHGA6Q9Y5G7 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHGA6Q9Y5G7 AC099791.2-201ENST00000605725 427 ntBASIC21.44■■□□□ 1.02
PCDHGA6Q9Y5G7 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHGA6Q9Y5G7 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHGA6Q9Y5G7 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
PCDHGA6Q9Y5G7 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHGA6Q9Y5G7 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms