Protein–RNA interactions for Protein: Q9UBB5

MBD2, Methyl-CpG-binding domain protein 2, humanhuman

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD2Q9UBB5 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
MBD2Q9UBB5 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MBD2Q9UBB5 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MBD2Q9UBB5 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MBD2Q9UBB5 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MBD2Q9UBB5 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MBD2Q9UBB5 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
MBD2Q9UBB5 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
MBD2Q9UBB5 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
MBD2Q9UBB5 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC18.69■□□□□ 0.58
MBD2Q9UBB5 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC18.69■□□□□ 0.58
MBD2Q9UBB5 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
MBD2Q9UBB5 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
MBD2Q9UBB5 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.69■□□□□ 0.58
MBD2Q9UBB5 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC18.69■□□□□ 0.58
MBD2Q9UBB5 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
MBD2Q9UBB5 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
MBD2Q9UBB5 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC18.68■□□□□ 0.58
MBD2Q9UBB5 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MBD2Q9UBB5 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
MBD2Q9UBB5 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MBD2Q9UBB5 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC18.68■□□□□ 0.58
MBD2Q9UBB5 CHML-204ENST00000638121 920 ntTSL 2 BASIC18.68■□□□□ 0.58
MBD2Q9UBB5 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
MBD2Q9UBB5 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
MBD2Q9UBB5 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
MBD2Q9UBB5 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.67■□□□□ 0.58
MBD2Q9UBB5 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
MBD2Q9UBB5 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
MBD2Q9UBB5 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
MBD2Q9UBB5 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.67■□□□□ 0.58
MBD2Q9UBB5 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MBD2Q9UBB5 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MBD2Q9UBB5 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
MBD2Q9UBB5 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MBD2Q9UBB5 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MBD2Q9UBB5 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.67■□□□□ 0.58
MBD2Q9UBB5 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
MBD2Q9UBB5 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
MBD2Q9UBB5 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MBD2Q9UBB5 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.66■□□□□ 0.58
MBD2Q9UBB5 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
MBD2Q9UBB5 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC18.66■□□□□ 0.58
MBD2Q9UBB5 AC021231.2-201ENST00000594613 730 ntBASIC18.66■□□□□ 0.58
MBD2Q9UBB5 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MBD2Q9UBB5 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
MBD2Q9UBB5 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MBD2Q9UBB5 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MBD2Q9UBB5 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MBD2Q9UBB5 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
MBD2Q9UBB5 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
MBD2Q9UBB5 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
MBD2Q9UBB5 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MBD2Q9UBB5 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MBD2Q9UBB5 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MBD2Q9UBB5 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC18.65■□□□□ 0.58
MBD2Q9UBB5 MED25-210ENST00000612854 801 ntTSL 5 BASIC18.65■□□□□ 0.58
MBD2Q9UBB5 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MBD2Q9UBB5 MED25-214ENST00000622402 642 ntTSL 5 BASIC18.65■□□□□ 0.58
MBD2Q9UBB5 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MBD2Q9UBB5 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
MBD2Q9UBB5 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
MBD2Q9UBB5 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC18.65■□□□□ 0.58
MBD2Q9UBB5 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
MBD2Q9UBB5 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.58
MBD2Q9UBB5 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
MBD2Q9UBB5 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
MBD2Q9UBB5 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
MBD2Q9UBB5 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
MBD2Q9UBB5 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.64■□□□□ 0.57
MBD2Q9UBB5 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
MBD2Q9UBB5 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
MBD2Q9UBB5 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MBD2Q9UBB5 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
MBD2Q9UBB5 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MBD2Q9UBB5 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.64■□□□□ 0.57
MBD2Q9UBB5 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.64■□□□□ 0.57
MBD2Q9UBB5 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MBD2Q9UBB5 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
MBD2Q9UBB5 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MBD2Q9UBB5 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MBD2Q9UBB5 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.63■□□□□ 0.57
MBD2Q9UBB5 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MBD2Q9UBB5 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
MBD2Q9UBB5 CHST11-203ENST00000547956 936 ntTSL 2 BASIC18.63■□□□□ 0.57
MBD2Q9UBB5 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
MBD2Q9UBB5 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
MBD2Q9UBB5 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
MBD2Q9UBB5 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MBD2Q9UBB5 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
MBD2Q9UBB5 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MBD2Q9UBB5 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
MBD2Q9UBB5 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
MBD2Q9UBB5 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.62■□□□□ 0.57
MBD2Q9UBB5 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MBD2Q9UBB5 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MBD2Q9UBB5 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
MBD2Q9UBB5 CHST11-202ENST00000546689 756 ntTSL 2 BASIC18.62■□□□□ 0.57
MBD2Q9UBB5 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC18.62■□□□□ 0.57
MBD2Q9UBB5 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms