Protein–RNA interactions for Protein: Q9P1A2

PPP4R1L, Putative serine/threonine-protein phosphatase 4 regulatory subunit 1-like, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1LQ9P1A2 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.48■□□□□ 0.87
PPP4R1LQ9P1A2 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
PPP4R1LQ9P1A2 AC144652.1-201ENST00000609974 1624 ntBASIC20.48■□□□□ 0.87
PPP4R1LQ9P1A2 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.47■□□□□ 0.87
PPP4R1LQ9P1A2 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PPP4R1LQ9P1A2 AC092171.4-201ENST00000609130 632 ntBASIC20.47■□□□□ 0.87
PPP4R1LQ9P1A2 AC241377.3-202ENST00000626088 1088 ntBASIC20.47■□□□□ 0.87
PPP4R1LQ9P1A2 AC241585.3-202ENST00000628937 1088 ntBASIC20.47■□□□□ 0.87
PPP4R1LQ9P1A2 AC245100.8-202ENST00000629247 1058 ntBASIC20.47■□□□□ 0.87
PPP4R1LQ9P1A2 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.47■□□□□ 0.87
PPP4R1LQ9P1A2 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
PPP4R1LQ9P1A2 AC079630.1-202ENST00000618127 1840 ntBASIC20.47■□□□□ 0.87
PPP4R1LQ9P1A2 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.47■□□□□ 0.87
PPP4R1LQ9P1A2 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PPP4R1LQ9P1A2 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PPP4R1LQ9P1A2 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.46■□□□□ 0.87
PPP4R1LQ9P1A2 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PPP4R1LQ9P1A2 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.46■□□□□ 0.87
PPP4R1LQ9P1A2 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PPP4R1LQ9P1A2 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PPP4R1LQ9P1A2 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
PPP4R1LQ9P1A2 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.46■□□□□ 0.87
PPP4R1LQ9P1A2 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PPP4R1LQ9P1A2 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
PPP4R1LQ9P1A2 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
PPP4R1LQ9P1A2 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
PPP4R1LQ9P1A2 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.46■□□□□ 0.87
PPP4R1LQ9P1A2 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.46■□□□□ 0.87
PPP4R1LQ9P1A2 ANOS2P-203ENST00000472227 1816 ntBASIC20.46■□□□□ 0.87
PPP4R1LQ9P1A2 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.45■□□□□ 0.87
PPP4R1LQ9P1A2 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PPP4R1LQ9P1A2 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.45■□□□□ 0.86
PPP4R1LQ9P1A2 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PPP4R1LQ9P1A2 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.45■□□□□ 0.86
PPP4R1LQ9P1A2 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.45■□□□□ 0.86
PPP4R1LQ9P1A2 AC099791.2-201ENST00000605725 427 ntBASIC20.45■□□□□ 0.86
PPP4R1LQ9P1A2 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
PPP4R1LQ9P1A2 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PPP4R1LQ9P1A2 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PPP4R1LQ9P1A2 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PPP4R1LQ9P1A2 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
PPP4R1LQ9P1A2 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.44■□□□□ 0.86
PPP4R1LQ9P1A2 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
PPP4R1LQ9P1A2 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
PPP4R1LQ9P1A2 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PPP4R1LQ9P1A2 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PPP4R1LQ9P1A2 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
PPP4R1LQ9P1A2 AC009086.3-201ENST00000623486 1008 ntBASIC20.44■□□□□ 0.86
PPP4R1LQ9P1A2 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PPP4R1LQ9P1A2 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PPP4R1LQ9P1A2 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.44■□□□□ 0.86
PPP4R1LQ9P1A2 FP325331.1-202ENST00000623531 1380 ntBASIC20.44■□□□□ 0.86
PPP4R1LQ9P1A2 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.44■□□□□ 0.86
PPP4R1LQ9P1A2 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PPP4R1LQ9P1A2 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PPP4R1LQ9P1A2 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PPP4R1LQ9P1A2 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PPP4R1LQ9P1A2 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.43■□□□□ 0.86
PPP4R1LQ9P1A2 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PPP4R1LQ9P1A2 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
PPP4R1LQ9P1A2 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
PPP4R1LQ9P1A2 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
PPP4R1LQ9P1A2 LINC01529-204ENST00000636474 1715 ntBASIC20.42■□□□□ 0.86
PPP4R1LQ9P1A2 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PPP4R1LQ9P1A2 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PPP4R1LQ9P1A2 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.42■□□□□ 0.86
PPP4R1LQ9P1A2 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.42■□□□□ 0.86
PPP4R1LQ9P1A2 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
PPP4R1LQ9P1A2 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PPP4R1LQ9P1A2 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.42■□□□□ 0.86
PPP4R1LQ9P1A2 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PPP4R1LQ9P1A2 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.42■□□□□ 0.86
PPP4R1LQ9P1A2 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.41■□□□□ 0.86
PPP4R1LQ9P1A2 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PPP4R1LQ9P1A2 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.41■□□□□ 0.86
PPP4R1LQ9P1A2 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
PPP4R1LQ9P1A2 DUX4L19-201ENST00000557448 1267 ntBASIC20.41■□□□□ 0.86
PPP4R1LQ9P1A2 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.41■□□□□ 0.86
PPP4R1LQ9P1A2 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PPP4R1LQ9P1A2 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PPP4R1LQ9P1A2 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.41■□□□□ 0.86
PPP4R1LQ9P1A2 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PPP4R1LQ9P1A2 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PPP4R1LQ9P1A2 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PPP4R1LQ9P1A2 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PPP4R1LQ9P1A2 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PPP4R1LQ9P1A2 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PPP4R1LQ9P1A2 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.4■□□□□ 0.86
PPP4R1LQ9P1A2 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PPP4R1LQ9P1A2 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PPP4R1LQ9P1A2 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
PPP4R1LQ9P1A2 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PPP4R1LQ9P1A2 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PPP4R1LQ9P1A2 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
PPP4R1LQ9P1A2 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.4■□□□□ 0.86
PPP4R1LQ9P1A2 AC092068.2-201ENST00000590491 1708 ntBASIC20.4■□□□□ 0.86
PPP4R1LQ9P1A2 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PPP4R1LQ9P1A2 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PPP4R1LQ9P1A2 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.39■□□□□ 0.85
PPP4R1LQ9P1A2 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms