Protein–RNA interactions for Protein: Q9HCI7

MSL2, E3 ubiquitin-protein ligase MSL2, humanhuman

Predictions only

Length 577 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSL2Q9HCI7 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.19■□□□□ 0.66
MSL2Q9HCI7 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.19■□□□□ 0.66
MSL2Q9HCI7 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
MSL2Q9HCI7 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.19■□□□□ 0.66
MSL2Q9HCI7 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
MSL2Q9HCI7 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
MSL2Q9HCI7 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.19■□□□□ 0.66
MSL2Q9HCI7 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.19■□□□□ 0.66
MSL2Q9HCI7 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
MSL2Q9HCI7 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.18■□□□□ 0.66
MSL2Q9HCI7 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.18■□□□□ 0.66
MSL2Q9HCI7 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MSL2Q9HCI7 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MSL2Q9HCI7 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
MSL2Q9HCI7 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
MSL2Q9HCI7 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MSL2Q9HCI7 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
MSL2Q9HCI7 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
MSL2Q9HCI7 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.17■□□□□ 0.66
MSL2Q9HCI7 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
MSL2Q9HCI7 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
MSL2Q9HCI7 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
MSL2Q9HCI7 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
MSL2Q9HCI7 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MSL2Q9HCI7 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
MSL2Q9HCI7 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC19.16■□□□□ 0.66
MSL2Q9HCI7 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.16■□□□□ 0.66
MSL2Q9HCI7 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.16■□□□□ 0.66
MSL2Q9HCI7 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
MSL2Q9HCI7 AC079630.1-202ENST00000618127 1840 ntBASIC19.16■□□□□ 0.66
MSL2Q9HCI7 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
MSL2Q9HCI7 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.15■□□□□ 0.66
MSL2Q9HCI7 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MSL2Q9HCI7 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
MSL2Q9HCI7 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
MSL2Q9HCI7 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MSL2Q9HCI7 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
MSL2Q9HCI7 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MSL2Q9HCI7 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
MSL2Q9HCI7 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
MSL2Q9HCI7 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
MSL2Q9HCI7 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.15■□□□□ 0.66
MSL2Q9HCI7 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MSL2Q9HCI7 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.15■□□□□ 0.66
MSL2Q9HCI7 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
MSL2Q9HCI7 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
MSL2Q9HCI7 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
MSL2Q9HCI7 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
MSL2Q9HCI7 ANOS2P-203ENST00000472227 1816 ntBASIC19.14■□□□□ 0.65
MSL2Q9HCI7 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MSL2Q9HCI7 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
MSL2Q9HCI7 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.14■□□□□ 0.65
MSL2Q9HCI7 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.14■□□□□ 0.65
MSL2Q9HCI7 AC099791.2-201ENST00000605725 427 ntBASIC19.14■□□□□ 0.65
MSL2Q9HCI7 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.14■□□□□ 0.65
MSL2Q9HCI7 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
MSL2Q9HCI7 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MSL2Q9HCI7 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MSL2Q9HCI7 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MSL2Q9HCI7 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.13■□□□□ 0.65
MSL2Q9HCI7 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
MSL2Q9HCI7 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.13■□□□□ 0.65
MSL2Q9HCI7 AC144652.1-201ENST00000609974 1624 ntBASIC19.13■□□□□ 0.65
MSL2Q9HCI7 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.13■□□□□ 0.65
MSL2Q9HCI7 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.13■□□□□ 0.65
MSL2Q9HCI7 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MSL2Q9HCI7 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
MSL2Q9HCI7 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
MSL2Q9HCI7 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
MSL2Q9HCI7 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.12■□□□□ 0.65
MSL2Q9HCI7 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
MSL2Q9HCI7 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.12■□□□□ 0.65
MSL2Q9HCI7 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
MSL2Q9HCI7 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
MSL2Q9HCI7 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MSL2Q9HCI7 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
MSL2Q9HCI7 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.11■□□□□ 0.65
MSL2Q9HCI7 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.11■□□□□ 0.65
MSL2Q9HCI7 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MSL2Q9HCI7 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
MSL2Q9HCI7 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
MSL2Q9HCI7 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
MSL2Q9HCI7 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.11■□□□□ 0.65
MSL2Q9HCI7 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MSL2Q9HCI7 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.11■□□□□ 0.65
MSL2Q9HCI7 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.11■□□□□ 0.65
MSL2Q9HCI7 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.11■□□□□ 0.65
MSL2Q9HCI7 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.11■□□□□ 0.65
MSL2Q9HCI7 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
MSL2Q9HCI7 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MSL2Q9HCI7 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
MSL2Q9HCI7 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
MSL2Q9HCI7 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MSL2Q9HCI7 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
MSL2Q9HCI7 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MSL2Q9HCI7 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
MSL2Q9HCI7 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MSL2Q9HCI7 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
MSL2Q9HCI7 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19.1■□□□□ 0.65
MSL2Q9HCI7 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 12.6 ms