Protein–RNA interactions for Protein: Q9HCI7

MSL2, E3 ubiquitin-protein ligase MSL2, humanhuman

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSL2Q9HCI7 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.19■□□□□ 0.66
MSL2Q9HCI7 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.19■□□□□ 0.66
MSL2Q9HCI7 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
MSL2Q9HCI7 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.19■□□□□ 0.66
MSL2Q9HCI7 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
MSL2Q9HCI7 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
MSL2Q9HCI7 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.19■□□□□ 0.66
MSL2Q9HCI7 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.19■□□□□ 0.66
MSL2Q9HCI7 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
MSL2Q9HCI7 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.18■□□□□ 0.66
MSL2Q9HCI7 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.18■□□□□ 0.66
MSL2Q9HCI7 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MSL2Q9HCI7 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MSL2Q9HCI7 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
MSL2Q9HCI7 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
MSL2Q9HCI7 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MSL2Q9HCI7 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
MSL2Q9HCI7 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
MSL2Q9HCI7 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.17■□□□□ 0.66
MSL2Q9HCI7 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
MSL2Q9HCI7 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
MSL2Q9HCI7 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
MSL2Q9HCI7 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
MSL2Q9HCI7 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MSL2Q9HCI7 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
MSL2Q9HCI7 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC19.16■□□□□ 0.66
MSL2Q9HCI7 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.16■□□□□ 0.66
MSL2Q9HCI7 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.16■□□□□ 0.66
MSL2Q9HCI7 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
MSL2Q9HCI7 AC079630.1-202ENST00000618127 1840 ntBASIC19.16■□□□□ 0.66
MSL2Q9HCI7 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
MSL2Q9HCI7 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.15■□□□□ 0.66
MSL2Q9HCI7 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MSL2Q9HCI7 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
MSL2Q9HCI7 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
MSL2Q9HCI7 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MSL2Q9HCI7 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
MSL2Q9HCI7 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MSL2Q9HCI7 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
MSL2Q9HCI7 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
MSL2Q9HCI7 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
MSL2Q9HCI7 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.15■□□□□ 0.66
MSL2Q9HCI7 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MSL2Q9HCI7 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.15■□□□□ 0.66
MSL2Q9HCI7 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
MSL2Q9HCI7 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
MSL2Q9HCI7 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
MSL2Q9HCI7 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
MSL2Q9HCI7 ANOS2P-203ENST00000472227 1816 ntBASIC19.14■□□□□ 0.65
MSL2Q9HCI7 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MSL2Q9HCI7 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
MSL2Q9HCI7 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.14■□□□□ 0.65
MSL2Q9HCI7 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.14■□□□□ 0.65
MSL2Q9HCI7 AC099791.2-201ENST00000605725 427 ntBASIC19.14■□□□□ 0.65
MSL2Q9HCI7 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.14■□□□□ 0.65
MSL2Q9HCI7 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
MSL2Q9HCI7 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MSL2Q9HCI7 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MSL2Q9HCI7 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MSL2Q9HCI7 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.13■□□□□ 0.65
MSL2Q9HCI7 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
MSL2Q9HCI7 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.13■□□□□ 0.65
MSL2Q9HCI7 AC144652.1-201ENST00000609974 1624 ntBASIC19.13■□□□□ 0.65
MSL2Q9HCI7 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.13■□□□□ 0.65
MSL2Q9HCI7 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.13■□□□□ 0.65
MSL2Q9HCI7 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MSL2Q9HCI7 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
MSL2Q9HCI7 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
MSL2Q9HCI7 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
MSL2Q9HCI7 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.12■□□□□ 0.65
MSL2Q9HCI7 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
MSL2Q9HCI7 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.12■□□□□ 0.65
MSL2Q9HCI7 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
MSL2Q9HCI7 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
MSL2Q9HCI7 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MSL2Q9HCI7 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
MSL2Q9HCI7 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.11■□□□□ 0.65
MSL2Q9HCI7 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.11■□□□□ 0.65
MSL2Q9HCI7 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MSL2Q9HCI7 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
MSL2Q9HCI7 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
MSL2Q9HCI7 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
MSL2Q9HCI7 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.11■□□□□ 0.65
MSL2Q9HCI7 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MSL2Q9HCI7 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.11■□□□□ 0.65
MSL2Q9HCI7 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.11■□□□□ 0.65
MSL2Q9HCI7 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.11■□□□□ 0.65
MSL2Q9HCI7 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.11■□□□□ 0.65
MSL2Q9HCI7 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
MSL2Q9HCI7 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MSL2Q9HCI7 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
MSL2Q9HCI7 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
MSL2Q9HCI7 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MSL2Q9HCI7 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
MSL2Q9HCI7 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MSL2Q9HCI7 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
MSL2Q9HCI7 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MSL2Q9HCI7 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
MSL2Q9HCI7 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19.1■□□□□ 0.65
MSL2Q9HCI7 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms