Protein–RNA interactions for Protein: Q9H3S7

PTPN23, Tyrosine-protein phosphatase non-receptor type 23, humanhuman

Predictions only

Length 1,636 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN23Q9H3S7 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC34.17■■■■□ 3.06
PTPN23Q9H3S7 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC34.17■■■■□ 3.06
PTPN23Q9H3S7 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC34.17■■■■□ 3.06
PTPN23Q9H3S7 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC34.17■■■■□ 3.06
PTPN23Q9H3S7 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC34.17■■■■□ 3.06
PTPN23Q9H3S7 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC34.16■■■■□ 3.06
PTPN23Q9H3S7 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC34.16■■■■□ 3.06
PTPN23Q9H3S7 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC34.16■■■■□ 3.06
PTPN23Q9H3S7 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC34.16■■■■□ 3.06
PTPN23Q9H3S7 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC34.16■■■■□ 3.06
PTPN23Q9H3S7 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC34.16■■■■□ 3.06
PTPN23Q9H3S7 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC34.16■■■■□ 3.06
PTPN23Q9H3S7 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC34.16■■■■□ 3.06
PTPN23Q9H3S7 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC34.16■■■■□ 3.06
PTPN23Q9H3S7 AC010525.1-201ENST00000585559 441 ntBASIC34.16■■■■□ 3.06
PTPN23Q9H3S7 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC34.16■■■■□ 3.06
PTPN23Q9H3S7 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC34.16■■■■□ 3.06
PTPN23Q9H3S7 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC34.16■■■■□ 3.06
PTPN23Q9H3S7 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC34.16■■■■□ 3.06
PTPN23Q9H3S7 OR2I1P-207ENST00000453522 948 ntBASIC34.15■■■■□ 3.06
PTPN23Q9H3S7 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC34.15■■■■□ 3.06
PTPN23Q9H3S7 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC34.15■■■■□ 3.06
PTPN23Q9H3S7 DUX4L4-201ENST00000566884 1269 ntBASIC34.15■■■■□ 3.06
PTPN23Q9H3S7 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC34.15■■■■□ 3.06
PTPN23Q9H3S7 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC34.15■■■■□ 3.06
PTPN23Q9H3S7 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC34.14■■■■□ 3.06
PTPN23Q9H3S7 AC004812.2-201ENST00000611079 2094 ntBASIC34.14■■■■□ 3.06
PTPN23Q9H3S7 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC34.13■■■■□ 3.05
PTPN23Q9H3S7 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC34.13■■■■□ 3.05
PTPN23Q9H3S7 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC34.13■■■■□ 3.05
PTPN23Q9H3S7 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC34.13■■■■□ 3.05
PTPN23Q9H3S7 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC34.13■■■■□ 3.05
PTPN23Q9H3S7 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC34.13■■■■□ 3.05
PTPN23Q9H3S7 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC34.13■■■■□ 3.05
PTPN23Q9H3S7 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC34.12■■■■□ 3.05
PTPN23Q9H3S7 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC34.12■■■■□ 3.05
PTPN23Q9H3S7 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC34.12■■■■□ 3.05
PTPN23Q9H3S7 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC34.12■■■■□ 3.05
PTPN23Q9H3S7 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC34.12■■■■□ 3.05
PTPN23Q9H3S7 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC34.12■■■■□ 3.05
PTPN23Q9H3S7 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC34.12■■■■□ 3.05
PTPN23Q9H3S7 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC34.12■■■■□ 3.05
PTPN23Q9H3S7 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC34.12■■■■□ 3.05
PTPN23Q9H3S7 PREB-202ENST00000406567 1910 ntTSL 5 BASIC34.12■■■■□ 3.05
PTPN23Q9H3S7 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC34.12■■■■□ 3.05
PTPN23Q9H3S7 MIR6821-201ENST00000617625 74 ntBASIC34.12■■■■□ 3.05
PTPN23Q9H3S7 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC34.11■■■■□ 3.05
PTPN23Q9H3S7 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC34.11■■■■□ 3.05
PTPN23Q9H3S7 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC34.11■■■■□ 3.05
PTPN23Q9H3S7 FP325331.1-202ENST00000623531 1380 ntBASIC34.11■■■■□ 3.05
PTPN23Q9H3S7 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC34.11■■■■□ 3.05
PTPN23Q9H3S7 GRAMD4P2-201ENST00000423297 1097 ntBASIC34.11■■■■□ 3.05
PTPN23Q9H3S7 AC097381.1-201ENST00000429019 1296 ntBASIC34.11■■■■□ 3.05
PTPN23Q9H3S7 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC34.11■■■■□ 3.05
PTPN23Q9H3S7 AC079630.1-202ENST00000618127 1840 ntBASIC34.11■■■■□ 3.05
PTPN23Q9H3S7 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC34.11■■■■□ 3.05
PTPN23Q9H3S7 IRS3P-201ENST00000223076 1006 ntBASIC34.1■■■■□ 3.05
PTPN23Q9H3S7 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC34.1■■■■□ 3.05
PTPN23Q9H3S7 IGHV3-19-201ENST00000521488 291 ntBASIC34.1■■■■□ 3.05
PTPN23Q9H3S7 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC34.1■■■■□ 3.05
PTPN23Q9H3S7 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC34.1■■■■□ 3.05
PTPN23Q9H3S7 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC34.1■■■■□ 3.05
PTPN23Q9H3S7 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC34.09■■■■□ 3.05
PTPN23Q9H3S7 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC34.09■■■■□ 3.05
PTPN23Q9H3S7 JTB-203ENST00000368589 1216 ntTSL 2 BASIC34.08■■■■□ 3.05
PTPN23Q9H3S7 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC34.08■■■■□ 3.05
PTPN23Q9H3S7 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC34.08■■■■□ 3.05
PTPN23Q9H3S7 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC34.08■■■■□ 3.05
PTPN23Q9H3S7 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC34.08■■■■□ 3.05
PTPN23Q9H3S7 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC34.08■■■■□ 3.05
PTPN23Q9H3S7 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC34.08■■■■□ 3.05
PTPN23Q9H3S7 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC34.08■■■■□ 3.05
PTPN23Q9H3S7 AC087623.3-201ENST00000607047 1098 ntBASIC34.08■■■■□ 3.05
PTPN23Q9H3S7 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC34.07■■■■□ 3.05
PTPN23Q9H3S7 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC34.07■■■■□ 3.05
PTPN23Q9H3S7 TSPY26P-201ENST00000476365 1326 ntBASIC34.07■■■■□ 3.05
PTPN23Q9H3S7 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC34.07■■■■□ 3.05
PTPN23Q9H3S7 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC34.07■■■■□ 3.04
PTPN23Q9H3S7 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC34.07■■■■□ 3.04
PTPN23Q9H3S7 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC34.07■■■■□ 3.04
PTPN23Q9H3S7 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC34.07■■■■□ 3.04
PTPN23Q9H3S7 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC34.07■■■■□ 3.04
PTPN23Q9H3S7 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC34.06■■■■□ 3.04
PTPN23Q9H3S7 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC34.06■■■■□ 3.04
PTPN23Q9H3S7 PLD4-205ENST00000553861 667 ntTSL 2 BASIC34.06■■■■□ 3.04
PTPN23Q9H3S7 AC126544.1-201ENST00000580842 1059 ntBASIC34.06■■■■□ 3.04
PTPN23Q9H3S7 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC34.06■■■■□ 3.04
PTPN23Q9H3S7 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC34.05■■■■□ 3.04
PTPN23Q9H3S7 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC34.05■■■■□ 3.04
PTPN23Q9H3S7 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC34.05■■■■□ 3.04
PTPN23Q9H3S7 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC34.04■■■■□ 3.04
PTPN23Q9H3S7 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC34.04■■■■□ 3.04
PTPN23Q9H3S7 MIR5787-201ENST00000611784 55 ntBASIC34.04■■■■□ 3.04
PTPN23Q9H3S7 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC34.04■■■■□ 3.04
PTPN23Q9H3S7 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC34.04■■■■□ 3.04
PTPN23Q9H3S7 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC34.04■■■■□ 3.04
PTPN23Q9H3S7 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC34.04■■■■□ 3.04
PTPN23Q9H3S7 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC34.04■■■■□ 3.04
PTPN23Q9H3S7 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC34.04■■■■□ 3.04
PTPN23Q9H3S7 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC34.04■■■■□ 3.04
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms