Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
NUCKS1Q9H1E3 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC24.25■■□□□ 1.47
NUCKS1Q9H1E3 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC24.25■■□□□ 1.47
NUCKS1Q9H1E3 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
NUCKS1Q9H1E3 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
NUCKS1Q9H1E3 GUSBP5-202ENST00000510805 1989 ntBASIC24.24■■□□□ 1.47
NUCKS1Q9H1E3 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
NUCKS1Q9H1E3 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC24.24■■□□□ 1.47
NUCKS1Q9H1E3 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
NUCKS1Q9H1E3 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC24.24■■□□□ 1.47
NUCKS1Q9H1E3 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
NUCKS1Q9H1E3 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
NUCKS1Q9H1E3 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
NUCKS1Q9H1E3 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC24.23■■□□□ 1.47
NUCKS1Q9H1E3 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
NUCKS1Q9H1E3 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
NUCKS1Q9H1E3 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
NUCKS1Q9H1E3 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
NUCKS1Q9H1E3 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
NUCKS1Q9H1E3 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
NUCKS1Q9H1E3 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
NUCKS1Q9H1E3 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
NUCKS1Q9H1E3 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC24.23■■□□□ 1.47
NUCKS1Q9H1E3 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC24.22■■□□□ 1.47
NUCKS1Q9H1E3 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC24.22■■□□□ 1.47
NUCKS1Q9H1E3 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.47
NUCKS1Q9H1E3 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.47
NUCKS1Q9H1E3 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
NUCKS1Q9H1E3 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC24.21■■□□□ 1.47
NUCKS1Q9H1E3 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
NUCKS1Q9H1E3 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
NUCKS1Q9H1E3 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
NUCKS1Q9H1E3 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC24.21■■□□□ 1.47
NUCKS1Q9H1E3 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC24.21■■□□□ 1.47
NUCKS1Q9H1E3 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC24.21■■□□□ 1.47
NUCKS1Q9H1E3 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
NUCKS1Q9H1E3 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
NUCKS1Q9H1E3 AC239859.2-201ENST00000444165 318 ntBASIC24.21■■□□□ 1.47
NUCKS1Q9H1E3 OR2A1-AS1-204ENST00000470435 602 ntBASIC24.21■■□□□ 1.47
NUCKS1Q9H1E3 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC24.21■■□□□ 1.47
NUCKS1Q9H1E3 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
NUCKS1Q9H1E3 ECEL1P1-201ENST00000373592 1742 ntBASIC24.21■■□□□ 1.47
NUCKS1Q9H1E3 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.47
NUCKS1Q9H1E3 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
NUCKS1Q9H1E3 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC24.2■■□□□ 1.46
NUCKS1Q9H1E3 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC24.2■■□□□ 1.46
NUCKS1Q9H1E3 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC24.2■■□□□ 1.46
NUCKS1Q9H1E3 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC24.2■■□□□ 1.46
NUCKS1Q9H1E3 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
NUCKS1Q9H1E3 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC24.19■■□□□ 1.46
NUCKS1Q9H1E3 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
NUCKS1Q9H1E3 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC24.19■■□□□ 1.46
NUCKS1Q9H1E3 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
NUCKS1Q9H1E3 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
NUCKS1Q9H1E3 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC24.19■■□□□ 1.46
NUCKS1Q9H1E3 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
NUCKS1Q9H1E3 HES6-204ENST00000409182 863 ntTSL 2 BASIC24.19■■□□□ 1.46
NUCKS1Q9H1E3 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
NUCKS1Q9H1E3 LINC00526-201ENST00000581067 1875 ntBASIC24.19■■□□□ 1.46
NUCKS1Q9H1E3 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
NUCKS1Q9H1E3 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
NUCKS1Q9H1E3 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
NUCKS1Q9H1E3 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
NUCKS1Q9H1E3 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
NUCKS1Q9H1E3 Z92544.1-202ENST00000571933 1220 ntBASIC24.18■■□□□ 1.46
NUCKS1Q9H1E3 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
NUCKS1Q9H1E3 AC137630.3-201ENST00000607245 391 ntBASIC24.18■■□□□ 1.46
NUCKS1Q9H1E3 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
NUCKS1Q9H1E3 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC24.18■■□□□ 1.46
NUCKS1Q9H1E3 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
NUCKS1Q9H1E3 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
NUCKS1Q9H1E3 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC24.17■■□□□ 1.46
NUCKS1Q9H1E3 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC24.17■■□□□ 1.46
NUCKS1Q9H1E3 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
NUCKS1Q9H1E3 BX664725.1-201ENST00000438252 379 ntBASIC24.17■■□□□ 1.46
NUCKS1Q9H1E3 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC24.17■■□□□ 1.46
NUCKS1Q9H1E3 EP400NL-214ENST00000641289 2402 ntBASIC24.17■■□□□ 1.46
NUCKS1Q9H1E3 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC24.17■■□□□ 1.46
NUCKS1Q9H1E3 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
NUCKS1Q9H1E3 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC24.17■■□□□ 1.46
NUCKS1Q9H1E3 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
NUCKS1Q9H1E3 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
NUCKS1Q9H1E3 USF2-207ENST00000595068 1612 ntTSL 5 BASIC24.17■■□□□ 1.46
NUCKS1Q9H1E3 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
NUCKS1Q9H1E3 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
NUCKS1Q9H1E3 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
NUCKS1Q9H1E3 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC24.16■■□□□ 1.46
NUCKS1Q9H1E3 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
NUCKS1Q9H1E3 AC127496.7-201ENST00000625110 1798 ntBASIC24.16■■□□□ 1.46
NUCKS1Q9H1E3 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
NUCKS1Q9H1E3 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC24.16■■□□□ 1.46
NUCKS1Q9H1E3 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC24.16■■□□□ 1.46
NUCKS1Q9H1E3 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
NUCKS1Q9H1E3 GUSBP5-201ENST00000418136 578 ntBASIC24.16■■□□□ 1.46
NUCKS1Q9H1E3 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC24.16■■□□□ 1.46
NUCKS1Q9H1E3 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
NUCKS1Q9H1E3 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
NUCKS1Q9H1E3 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
NUCKS1Q9H1E3 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
NUCKS1Q9H1E3 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms