Protein–RNA interactions for Protein: Q96HR8

NAF1, H/ACA ribonucleoprotein complex non-core subunit NAF1, humanhuman

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NAF1Q96HR8 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC22.44■■□□□ 1.18
NAF1Q96HR8 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
NAF1Q96HR8 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC22.44■■□□□ 1.18
NAF1Q96HR8 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
NAF1Q96HR8 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
NAF1Q96HR8 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
NAF1Q96HR8 TK2-202ENST00000417693 1046 ntTSL 2 BASIC22.44■■□□□ 1.18
NAF1Q96HR8 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC22.44■■□□□ 1.18
NAF1Q96HR8 AC137767.1-201ENST00000602918 1920 ntBASIC22.44■■□□□ 1.18
NAF1Q96HR8 AL512631.2-201ENST00000604634 923 ntBASIC22.44■■□□□ 1.18
NAF1Q96HR8 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
NAF1Q96HR8 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
NAF1Q96HR8 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
NAF1Q96HR8 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
NAF1Q96HR8 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC22.43■■□□□ 1.18
NAF1Q96HR8 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
NAF1Q96HR8 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC22.43■■□□□ 1.18
NAF1Q96HR8 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC22.43■■□□□ 1.18
NAF1Q96HR8 CLTA-210ENST00000540080 989 ntTSL 2 BASIC22.43■■□□□ 1.18
NAF1Q96HR8 GAK-223ENST00000628912 497 ntTSL 5 BASIC22.43■■□□□ 1.18
NAF1Q96HR8 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
NAF1Q96HR8 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
NAF1Q96HR8 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
NAF1Q96HR8 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
NAF1Q96HR8 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC22.43■■□□□ 1.18
NAF1Q96HR8 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
NAF1Q96HR8 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
NAF1Q96HR8 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC22.43■■□□□ 1.18
NAF1Q96HR8 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC22.42■■□□□ 1.18
NAF1Q96HR8 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
NAF1Q96HR8 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
NAF1Q96HR8 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC22.42■■□□□ 1.18
NAF1Q96HR8 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
NAF1Q96HR8 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
NAF1Q96HR8 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
NAF1Q96HR8 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
NAF1Q96HR8 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
NAF1Q96HR8 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC22.42■■□□□ 1.18
NAF1Q96HR8 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC22.42■■□□□ 1.18
NAF1Q96HR8 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
NAF1Q96HR8 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC22.42■■□□□ 1.18
NAF1Q96HR8 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
NAF1Q96HR8 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC22.42■■□□□ 1.18
NAF1Q96HR8 AC004812.2-201ENST00000611079 2094 ntBASIC22.42■■□□□ 1.18
NAF1Q96HR8 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC22.41■■□□□ 1.18
NAF1Q96HR8 AC007375.3-201ENST00000600936 2314 ntBASIC22.41■■□□□ 1.18
NAF1Q96HR8 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC22.41■■□□□ 1.18
NAF1Q96HR8 CD72-202ENST00000378430 585 ntTSL 3 BASIC22.41■■□□□ 1.18
NAF1Q96HR8 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC22.41■■□□□ 1.18
NAF1Q96HR8 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
NAF1Q96HR8 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
NAF1Q96HR8 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC22.41■■□□□ 1.18
NAF1Q96HR8 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC22.41■■□□□ 1.18
NAF1Q96HR8 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
NAF1Q96HR8 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC22.4■■□□□ 1.18
NAF1Q96HR8 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC22.4■■□□□ 1.18
NAF1Q96HR8 RASSF1-AS1-201ENST00000629828 790 ntBASIC22.4■■□□□ 1.18
NAF1Q96HR8 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
NAF1Q96HR8 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
NAF1Q96HR8 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
NAF1Q96HR8 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
NAF1Q96HR8 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC22.4■■□□□ 1.18
NAF1Q96HR8 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC22.39■■□□□ 1.18
NAF1Q96HR8 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
NAF1Q96HR8 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
NAF1Q96HR8 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
NAF1Q96HR8 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
NAF1Q96HR8 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC22.39■■□□□ 1.17
NAF1Q96HR8 LGR4-203ENST00000480977 492 ntTSL 2 BASIC22.39■■□□□ 1.17
NAF1Q96HR8 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC22.39■■□□□ 1.17
NAF1Q96HR8 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC22.39■■□□□ 1.17
NAF1Q96HR8 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
NAF1Q96HR8 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
NAF1Q96HR8 AC106739.1-201ENST00000617035 715 ntBASIC22.39■■□□□ 1.17
NAF1Q96HR8 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC22.39■■□□□ 1.17
NAF1Q96HR8 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC22.39■■□□□ 1.17
NAF1Q96HR8 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
NAF1Q96HR8 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
NAF1Q96HR8 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
NAF1Q96HR8 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC22.38■■□□□ 1.17
NAF1Q96HR8 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
NAF1Q96HR8 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
NAF1Q96HR8 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
NAF1Q96HR8 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC22.37■■□□□ 1.17
NAF1Q96HR8 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
NAF1Q96HR8 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
NAF1Q96HR8 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
NAF1Q96HR8 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
NAF1Q96HR8 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
NAF1Q96HR8 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC22.37■■□□□ 1.17
NAF1Q96HR8 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC22.37■■□□□ 1.17
NAF1Q96HR8 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
NAF1Q96HR8 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC22.37■■□□□ 1.17
NAF1Q96HR8 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
NAF1Q96HR8 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
NAF1Q96HR8 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
NAF1Q96HR8 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC22.36■■□□□ 1.17
NAF1Q96HR8 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC22.36■■□□□ 1.17
NAF1Q96HR8 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
NAF1Q96HR8 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms