Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
ECHDC3Q96DC8 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
ECHDC3Q96DC8 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
ECHDC3Q96DC8 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
ECHDC3Q96DC8 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC22.5■■□□□ 1.19
ECHDC3Q96DC8 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
ECHDC3Q96DC8 MIR3181-201ENST00000578512 73 ntBASIC22.5■■□□□ 1.19
ECHDC3Q96DC8 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC22.5■■□□□ 1.19
ECHDC3Q96DC8 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC22.5■■□□□ 1.19
ECHDC3Q96DC8 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC22.5■■□□□ 1.19
ECHDC3Q96DC8 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
ECHDC3Q96DC8 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC22.5■■□□□ 1.19
ECHDC3Q96DC8 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
ECHDC3Q96DC8 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
ECHDC3Q96DC8 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC22.49■■□□□ 1.19
ECHDC3Q96DC8 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
ECHDC3Q96DC8 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC22.49■■□□□ 1.19
ECHDC3Q96DC8 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
ECHDC3Q96DC8 AC024257.2-201ENST00000549699 147 ntBASIC22.49■■□□□ 1.19
ECHDC3Q96DC8 AC133561.4-201ENST00000566112 224 ntBASIC22.49■■□□□ 1.19
ECHDC3Q96DC8 AC011298.3-201ENST00000615796 283 ntBASIC22.49■■□□□ 1.19
ECHDC3Q96DC8 AC135279.3-201ENST00000610945 1311 ntBASIC22.49■■□□□ 1.19
ECHDC3Q96DC8 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC22.49■■□□□ 1.19
ECHDC3Q96DC8 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
ECHDC3Q96DC8 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC22.49■■□□□ 1.19
ECHDC3Q96DC8 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
ECHDC3Q96DC8 ANOS2P-203ENST00000472227 1816 ntBASIC22.48■■□□□ 1.19
ECHDC3Q96DC8 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
ECHDC3Q96DC8 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
ECHDC3Q96DC8 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC22.48■■□□□ 1.19
ECHDC3Q96DC8 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC22.48■■□□□ 1.19
ECHDC3Q96DC8 MIR638-201ENST00000385237 100 ntBASIC22.48■■□□□ 1.19
ECHDC3Q96DC8 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
ECHDC3Q96DC8 AL499627.2-201ENST00000606283 725 ntBASIC22.48■■□□□ 1.19
ECHDC3Q96DC8 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
ECHDC3Q96DC8 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
ECHDC3Q96DC8 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC22.48■■□□□ 1.19
ECHDC3Q96DC8 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
ECHDC3Q96DC8 AC092068.2-201ENST00000590491 1708 ntBASIC22.48■■□□□ 1.19
ECHDC3Q96DC8 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC22.48■■□□□ 1.19
ECHDC3Q96DC8 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
ECHDC3Q96DC8 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
ECHDC3Q96DC8 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
ECHDC3Q96DC8 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
ECHDC3Q96DC8 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
ECHDC3Q96DC8 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
ECHDC3Q96DC8 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC22.47■■□□□ 1.19
ECHDC3Q96DC8 PBX2P1-201ENST00000493219 1291 ntBASIC22.47■■□□□ 1.19
ECHDC3Q96DC8 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC22.47■■□□□ 1.19
ECHDC3Q96DC8 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC22.47■■□□□ 1.19
ECHDC3Q96DC8 pRNA.6-201ENST00000610482 90 ntBASIC22.47■■□□□ 1.19
ECHDC3Q96DC8 pRNA.5-201ENST00000612139 90 ntBASIC22.47■■□□□ 1.19
ECHDC3Q96DC8 pRNA.11-201ENST00000618423 90 ntBASIC22.47■■□□□ 1.19
ECHDC3Q96DC8 pRNA.13-201ENST00000619112 90 ntBASIC22.47■■□□□ 1.19
ECHDC3Q96DC8 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC22.47■■□□□ 1.19
ECHDC3Q96DC8 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
ECHDC3Q96DC8 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
ECHDC3Q96DC8 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC22.47■■□□□ 1.19
ECHDC3Q96DC8 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC22.47■■□□□ 1.19
ECHDC3Q96DC8 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
ECHDC3Q96DC8 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC22.47■■□□□ 1.19
ECHDC3Q96DC8 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC22.47■■□□□ 1.19
ECHDC3Q96DC8 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC22.46■■□□□ 1.19
ECHDC3Q96DC8 HES6-206ENST00000409574 738 ntTSL 2 BASIC22.46■■□□□ 1.19
ECHDC3Q96DC8 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC22.46■■□□□ 1.19
ECHDC3Q96DC8 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC22.46■■□□□ 1.19
ECHDC3Q96DC8 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
ECHDC3Q96DC8 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC22.46■■□□□ 1.19
ECHDC3Q96DC8 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC22.46■■□□□ 1.19
ECHDC3Q96DC8 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC22.46■■□□□ 1.19
ECHDC3Q96DC8 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.19
ECHDC3Q96DC8 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC22.45■■□□□ 1.19
ECHDC3Q96DC8 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC22.45■■□□□ 1.18
ECHDC3Q96DC8 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC22.45■■□□□ 1.18
ECHDC3Q96DC8 AC136469.2-201ENST00000623944 1028 ntBASIC22.45■■□□□ 1.18
ECHDC3Q96DC8 RALB-208ENST00000631312 311 ntTSL 5 BASIC22.45■■□□□ 1.18
ECHDC3Q96DC8 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
ECHDC3Q96DC8 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC22.45■■□□□ 1.18
ECHDC3Q96DC8 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
ECHDC3Q96DC8 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC22.45■■□□□ 1.18
ECHDC3Q96DC8 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC22.45■■□□□ 1.18
ECHDC3Q96DC8 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC22.45■■□□□ 1.18
ECHDC3Q96DC8 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
ECHDC3Q96DC8 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
ECHDC3Q96DC8 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
ECHDC3Q96DC8 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC22.44■■□□□ 1.18
ECHDC3Q96DC8 THRA-202ENST00000394121 2260 ntTSL 2 BASIC22.44■■□□□ 1.18
ECHDC3Q96DC8 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
ECHDC3Q96DC8 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC22.44■■□□□ 1.18
ECHDC3Q96DC8 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC22.44■■□□□ 1.18
ECHDC3Q96DC8 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC22.44■■□□□ 1.18
ECHDC3Q96DC8 AL353803.4-201ENST00000565882 1934 ntBASIC22.43■■□□□ 1.18
ECHDC3Q96DC8 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
ECHDC3Q96DC8 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
ECHDC3Q96DC8 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
ECHDC3Q96DC8 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
ECHDC3Q96DC8 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC22.43■■□□□ 1.18
ECHDC3Q96DC8 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
ECHDC3Q96DC8 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
ECHDC3Q96DC8 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms