Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 PRTG-204ENST00000561292 833 ntTSL 3 BASIC19.61■□□□□ 0.73
RAB40AQ8WXH6 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.61■□□□□ 0.73
RAB40AQ8WXH6 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.61■□□□□ 0.73
RAB40AQ8WXH6 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
RAB40AQ8WXH6 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.61■□□□□ 0.73
RAB40AQ8WXH6 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RAB40AQ8WXH6 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RAB40AQ8WXH6 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB40AQ8WXH6 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB40AQ8WXH6 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB40AQ8WXH6 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB40AQ8WXH6 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB40AQ8WXH6 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB40AQ8WXH6 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB40AQ8WXH6 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.6■□□□□ 0.73
RAB40AQ8WXH6 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB40AQ8WXH6 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB40AQ8WXH6 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB40AQ8WXH6 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.6■□□□□ 0.73
RAB40AQ8WXH6 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB40AQ8WXH6 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.6■□□□□ 0.73
RAB40AQ8WXH6 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RAB40AQ8WXH6 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB40AQ8WXH6 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAB40AQ8WXH6 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAB40AQ8WXH6 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.59■□□□□ 0.73
RAB40AQ8WXH6 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAB40AQ8WXH6 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAB40AQ8WXH6 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.59■□□□□ 0.73
RAB40AQ8WXH6 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.59■□□□□ 0.73
RAB40AQ8WXH6 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAB40AQ8WXH6 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.59■□□□□ 0.73
RAB40AQ8WXH6 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.59■□□□□ 0.73
RAB40AQ8WXH6 KRT18P24-201ENST00000344739 1156 ntBASIC19.59■□□□□ 0.73
RAB40AQ8WXH6 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.59■□□□□ 0.73
RAB40AQ8WXH6 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.59■□□□□ 0.73
RAB40AQ8WXH6 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.59■□□□□ 0.73
RAB40AQ8WXH6 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAB40AQ8WXH6 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
RAB40AQ8WXH6 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RAB40AQ8WXH6 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RAB40AQ8WXH6 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
RAB40AQ8WXH6 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RAB40AQ8WXH6 AC242852.2-201ENST00000615738 1807 ntBASIC19.58■□□□□ 0.73
RAB40AQ8WXH6 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RAB40AQ8WXH6 ESRRAP2-201ENST00000418437 1549 ntBASIC19.58■□□□□ 0.73
RAB40AQ8WXH6 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.58■□□□□ 0.72
RAB40AQ8WXH6 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.58■□□□□ 0.72
RAB40AQ8WXH6 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.58■□□□□ 0.72
RAB40AQ8WXH6 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
RAB40AQ8WXH6 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RAB40AQ8WXH6 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAB40AQ8WXH6 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAB40AQ8WXH6 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
RAB40AQ8WXH6 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAB40AQ8WXH6 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
RAB40AQ8WXH6 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.57■□□□□ 0.72
RAB40AQ8WXH6 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAB40AQ8WXH6 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAB40AQ8WXH6 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAB40AQ8WXH6 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.56■□□□□ 0.72
RAB40AQ8WXH6 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.56■□□□□ 0.72
RAB40AQ8WXH6 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.56■□□□□ 0.72
RAB40AQ8WXH6 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAB40AQ8WXH6 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAB40AQ8WXH6 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAB40AQ8WXH6 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAB40AQ8WXH6 THA1P-201ENST00000590384 1145 ntBASIC19.56■□□□□ 0.72
RAB40AQ8WXH6 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RAB40AQ8WXH6 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
RAB40AQ8WXH6 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAB40AQ8WXH6 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAB40AQ8WXH6 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAB40AQ8WXH6 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAB40AQ8WXH6 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAB40AQ8WXH6 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.55■□□□□ 0.72
RAB40AQ8WXH6 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.55■□□□□ 0.72
RAB40AQ8WXH6 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RAB40AQ8WXH6 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.55■□□□□ 0.72
RAB40AQ8WXH6 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAB40AQ8WXH6 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RAB40AQ8WXH6 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RAB40AQ8WXH6 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
RAB40AQ8WXH6 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.55■□□□□ 0.72
RAB40AQ8WXH6 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.55■□□□□ 0.72
RAB40AQ8WXH6 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.55■□□□□ 0.72
RAB40AQ8WXH6 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.55■□□□□ 0.72
RAB40AQ8WXH6 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
RAB40AQ8WXH6 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAB40AQ8WXH6 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.55■□□□□ 0.72
RAB40AQ8WXH6 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
RAB40AQ8WXH6 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RAB40AQ8WXH6 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RAB40AQ8WXH6 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RAB40AQ8WXH6 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RAB40AQ8WXH6 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RAB40AQ8WXH6 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RAB40AQ8WXH6 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RAB40AQ8WXH6 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RAB40AQ8WXH6 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms