Protein–RNA interactions for Protein: Q8WUY3

PRUNE2, Protein prune homolog 2, humanhuman

Predictions only

Length 3,088 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE2Q8WUY3 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PRUNE2Q8WUY3 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC23.81■■□□□ 1.4
PRUNE2Q8WUY3 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC23.81■■□□□ 1.4
PRUNE2Q8WUY3 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC23.81■■□□□ 1.4
PRUNE2Q8WUY3 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC23.81■■□□□ 1.4
PRUNE2Q8WUY3 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC23.81■■□□□ 1.4
PRUNE2Q8WUY3 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC23.81■■□□□ 1.4
PRUNE2Q8WUY3 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PRUNE2Q8WUY3 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC23.8■■□□□ 1.4
PRUNE2Q8WUY3 AC011767.1-201ENST00000617410 1153 ntBASIC23.8■■□□□ 1.4
PRUNE2Q8WUY3 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PRUNE2Q8WUY3 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC23.8■■□□□ 1.4
PRUNE2Q8WUY3 AC083906.2-201ENST00000511578 360 ntBASIC23.8■■□□□ 1.4
PRUNE2Q8WUY3 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PRUNE2Q8WUY3 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PRUNE2Q8WUY3 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PRUNE2Q8WUY3 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
PRUNE2Q8WUY3 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PRUNE2Q8WUY3 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PRUNE2Q8WUY3 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
PRUNE2Q8WUY3 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC23.79■■□□□ 1.4
PRUNE2Q8WUY3 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PRUNE2Q8WUY3 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PRUNE2Q8WUY3 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
PRUNE2Q8WUY3 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PRUNE2Q8WUY3 AC073210.2-201ENST00000430369 194 ntBASIC23.79■■□□□ 1.4
PRUNE2Q8WUY3 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC23.79■■□□□ 1.4
PRUNE2Q8WUY3 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC23.79■■□□□ 1.4
PRUNE2Q8WUY3 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC23.78■■□□□ 1.4
PRUNE2Q8WUY3 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PRUNE2Q8WUY3 AC009086.3-201ENST00000623486 1008 ntBASIC23.78■■□□□ 1.4
PRUNE2Q8WUY3 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC23.78■■□□□ 1.4
PRUNE2Q8WUY3 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PRUNE2Q8WUY3 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PRUNE2Q8WUY3 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PRUNE2Q8WUY3 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC23.78■■□□□ 1.4
PRUNE2Q8WUY3 SHD-204ENST00000599689 1729 ntTSL 5 BASIC23.78■■□□□ 1.4
PRUNE2Q8WUY3 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PRUNE2Q8WUY3 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PRUNE2Q8WUY3 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PRUNE2Q8WUY3 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PRUNE2Q8WUY3 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
PRUNE2Q8WUY3 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PRUNE2Q8WUY3 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
PRUNE2Q8WUY3 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PRUNE2Q8WUY3 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PRUNE2Q8WUY3 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
PRUNE2Q8WUY3 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC23.77■■□□□ 1.4
PRUNE2Q8WUY3 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PRUNE2Q8WUY3 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
PRUNE2Q8WUY3 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PRUNE2Q8WUY3 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.39
PRUNE2Q8WUY3 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.39
PRUNE2Q8WUY3 USF2-207ENST00000595068 1612 ntTSL 5 BASIC23.77■■□□□ 1.39
PRUNE2Q8WUY3 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PRUNE2Q8WUY3 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PRUNE2Q8WUY3 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC23.76■■□□□ 1.39
PRUNE2Q8WUY3 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC23.76■■□□□ 1.39
PRUNE2Q8WUY3 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
PRUNE2Q8WUY3 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PRUNE2Q8WUY3 METTL15-202ENST00000403099 795 ntTSL 5 BASIC23.76■■□□□ 1.39
PRUNE2Q8WUY3 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PRUNE2Q8WUY3 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
PRUNE2Q8WUY3 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PRUNE2Q8WUY3 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PRUNE2Q8WUY3 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC23.75■■□□□ 1.39
PRUNE2Q8WUY3 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC23.75■■□□□ 1.39
PRUNE2Q8WUY3 FAM201B-201ENST00000458407 597 ntBASIC23.75■■□□□ 1.39
PRUNE2Q8WUY3 MFSD11-216ENST00000590393 1141 ntBASIC23.75■■□□□ 1.39
PRUNE2Q8WUY3 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC23.75■■□□□ 1.39
PRUNE2Q8WUY3 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PRUNE2Q8WUY3 LHPP-203ENST00000392757 840 ntTSL 3 BASIC23.75■■□□□ 1.39
PRUNE2Q8WUY3 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PRUNE2Q8WUY3 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PRUNE2Q8WUY3 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
PRUNE2Q8WUY3 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PRUNE2Q8WUY3 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC23.75■■□□□ 1.39
PRUNE2Q8WUY3 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
PRUNE2Q8WUY3 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PRUNE2Q8WUY3 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PRUNE2Q8WUY3 POU5F1P3-201ENST00000428824 1078 ntBASIC23.74■■□□□ 1.39
PRUNE2Q8WUY3 MDK-213ENST00000617138 635 ntTSL 2 BASIC23.74■■□□□ 1.39
PRUNE2Q8WUY3 ITM2C-210ENST00000620962 501 ntBASIC23.74■■□□□ 1.39
PRUNE2Q8WUY3 PFKL-212ENST00000628044 129 ntTSL 3 BASIC23.74■■□□□ 1.39
PRUNE2Q8WUY3 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
PRUNE2Q8WUY3 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC23.74■■□□□ 1.39
PRUNE2Q8WUY3 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC23.74■■□□□ 1.39
PRUNE2Q8WUY3 GCSHP5-201ENST00000443090 522 ntBASIC23.74■■□□□ 1.39
PRUNE2Q8WUY3 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC23.74■■□□□ 1.39
PRUNE2Q8WUY3 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC23.74■■□□□ 1.39
PRUNE2Q8WUY3 SMUG1P1-201ENST00000590640 811 ntBASIC23.74■■□□□ 1.39
PRUNE2Q8WUY3 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC23.74■■□□□ 1.39
PRUNE2Q8WUY3 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PRUNE2Q8WUY3 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
PRUNE2Q8WUY3 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PRUNE2Q8WUY3 CASP6-205ENST00000505486 538 ntTSL 4 BASIC23.73■■□□□ 1.39
PRUNE2Q8WUY3 AC097639.1-201ENST00000565519 1891 ntBASIC23.73■■□□□ 1.39
PRUNE2Q8WUY3 MPST-204ENST00000404393 1329 ntTSL 5 BASIC23.73■■□□□ 1.39
PRUNE2Q8WUY3 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
PRUNE2Q8WUY3 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms