Protein–RNA interactions for Protein: Q8N587

ZNF561, Zinc finger protein 561, humanhuman

Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF561Q8N587 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
ZNF561Q8N587 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ZNF561Q8N587 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ZNF561Q8N587 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
ZNF561Q8N587 TSPY9P-201ENST00000440215 945 ntBASIC18.95■□□□□ 0.62
ZNF561Q8N587 TSPY11P-201ENST00000442607 1045 ntBASIC18.95■□□□□ 0.62
ZNF561Q8N587 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC18.95■□□□□ 0.62
ZNF561Q8N587 AC010997.5-201ENST00000609182 354 ntBASIC18.95■□□□□ 0.62
ZNF561Q8N587 EXOG-217ENST00000630638 197 ntTSL 5 BASIC18.95■□□□□ 0.62
ZNF561Q8N587 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ZNF561Q8N587 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ZNF561Q8N587 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.95■□□□□ 0.62
ZNF561Q8N587 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC18.95■□□□□ 0.62
ZNF561Q8N587 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ZNF561Q8N587 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.95■□□□□ 0.62
ZNF561Q8N587 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
ZNF561Q8N587 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ZNF561Q8N587 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ZNF561Q8N587 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.94■□□□□ 0.62
ZNF561Q8N587 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC18.94■□□□□ 0.62
ZNF561Q8N587 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZNF561Q8N587 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZNF561Q8N587 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZNF561Q8N587 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZNF561Q8N587 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ZNF561Q8N587 CREM-229ENST00000474362 1030 ntTSL 2 BASIC18.94■□□□□ 0.62
ZNF561Q8N587 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZNF561Q8N587 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC18.94■□□□□ 0.62
ZNF561Q8N587 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZNF561Q8N587 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZNF561Q8N587 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZNF561Q8N587 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
ZNF561Q8N587 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF561Q8N587 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC18.93■□□□□ 0.62
ZNF561Q8N587 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF561Q8N587 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF561Q8N587 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF561Q8N587 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF561Q8N587 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF561Q8N587 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF561Q8N587 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF561Q8N587 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC18.93■□□□□ 0.62
ZNF561Q8N587 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF561Q8N587 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF561Q8N587 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF561Q8N587 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF561Q8N587 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.92■□□□□ 0.62
ZNF561Q8N587 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF561Q8N587 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF561Q8N587 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
ZNF561Q8N587 CLTA-206ENST00000466396 695 ntTSL 2 BASIC18.92■□□□□ 0.62
ZNF561Q8N587 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF561Q8N587 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF561Q8N587 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF561Q8N587 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF561Q8N587 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
ZNF561Q8N587 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC18.91■□□□□ 0.62
ZNF561Q8N587 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF561Q8N587 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
ZNF561Q8N587 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF561Q8N587 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF561Q8N587 GUSBP5-201ENST00000418136 578 ntBASIC18.91■□□□□ 0.62
ZNF561Q8N587 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC18.91■□□□□ 0.62
ZNF561Q8N587 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
ZNF561Q8N587 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC18.91■□□□□ 0.62
ZNF561Q8N587 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF561Q8N587 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF561Q8N587 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
ZNF561Q8N587 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF561Q8N587 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC18.9■□□□□ 0.62
ZNF561Q8N587 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
ZNF561Q8N587 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF561Q8N587 SLC25A24-204ENST00000569674 2357 ntBASIC18.9■□□□□ 0.62
ZNF561Q8N587 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF561Q8N587 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
ZNF561Q8N587 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF561Q8N587 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC18.9■□□□□ 0.62
ZNF561Q8N587 UNC93B8-201ENST00000511903 705 ntBASIC18.9■□□□□ 0.62
ZNF561Q8N587 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF561Q8N587 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC18.9■□□□□ 0.62
ZNF561Q8N587 DUSP8P5-201ENST00000422884 1815 ntBASIC18.9■□□□□ 0.62
ZNF561Q8N587 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF561Q8N587 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF561Q8N587 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC18.9■□□□□ 0.62
ZNF561Q8N587 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
ZNF561Q8N587 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.89■□□□□ 0.62
ZNF561Q8N587 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.89■□□□□ 0.62
ZNF561Q8N587 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.89■□□□□ 0.62
ZNF561Q8N587 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
ZNF561Q8N587 USF2-207ENST00000595068 1612 ntTSL 5 BASIC18.89■□□□□ 0.62
ZNF561Q8N587 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC18.89■□□□□ 0.61
ZNF561Q8N587 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
ZNF561Q8N587 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF561Q8N587 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF561Q8N587 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC18.89■□□□□ 0.61
ZNF561Q8N587 CD72-202ENST00000378430 585 ntTSL 3 BASIC18.89■□□□□ 0.61
ZNF561Q8N587 TFPT-201ENST00000391757 774 ntTSL 5 BASIC18.89■□□□□ 0.61
ZNF561Q8N587 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF561Q8N587 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC18.89■□□□□ 0.61
ZNF561Q8N587 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms