Protein–RNA interactions for Protein: Q8N328

PGBD3, PiggyBac transposable element-derived protein 3, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD3Q8N328 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
PGBD3Q8N328 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC22.72■■□□□ 1.23
PGBD3Q8N328 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC22.72■■□□□ 1.23
PGBD3Q8N328 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PGBD3Q8N328 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
PGBD3Q8N328 MED17-227ENST00000640521 2047 ntTSL 5 BASIC22.71■■□□□ 1.23
PGBD3Q8N328 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PGBD3Q8N328 SNX3-202ENST00000349379 890 ntTSL 2 BASIC22.71■■□□□ 1.23
PGBD3Q8N328 NME4-202ENST00000382940 766 ntTSL 3 BASIC22.71■■□□□ 1.23
PGBD3Q8N328 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PGBD3Q8N328 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC22.71■■□□□ 1.23
PGBD3Q8N328 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC22.71■■□□□ 1.23
PGBD3Q8N328 NME4-211ENST00000620944 1193 ntTSL 2 BASIC22.71■■□□□ 1.23
PGBD3Q8N328 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
PGBD3Q8N328 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC22.71■■□□□ 1.23
PGBD3Q8N328 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
PGBD3Q8N328 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC22.7■■□□□ 1.23
PGBD3Q8N328 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC22.7■■□□□ 1.22
PGBD3Q8N328 AC141586.4-201ENST00000624558 1573 ntBASIC22.7■■□□□ 1.22
PGBD3Q8N328 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
PGBD3Q8N328 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
PGBD3Q8N328 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC22.7■■□□□ 1.22
PGBD3Q8N328 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PGBD3Q8N328 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PGBD3Q8N328 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PGBD3Q8N328 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC22.69■■□□□ 1.22
PGBD3Q8N328 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC22.69■■□□□ 1.22
PGBD3Q8N328 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
PGBD3Q8N328 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
PGBD3Q8N328 AC034268.1-201ENST00000441047 882 ntBASIC22.69■■□□□ 1.22
PGBD3Q8N328 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
PGBD3Q8N328 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
PGBD3Q8N328 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC22.68■■□□□ 1.22
PGBD3Q8N328 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
PGBD3Q8N328 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
PGBD3Q8N328 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PGBD3Q8N328 GTSE1-AS1-202ENST00000623117 1518 ntBASIC22.68■■□□□ 1.22
PGBD3Q8N328 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC22.68■■□□□ 1.22
PGBD3Q8N328 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
PGBD3Q8N328 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PGBD3Q8N328 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
PGBD3Q8N328 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC22.67■■□□□ 1.22
PGBD3Q8N328 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PGBD3Q8N328 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
PGBD3Q8N328 ASB1-202ENST00000409297 878 ntTSL 5 BASIC22.67■■□□□ 1.22
PGBD3Q8N328 SLC47A1P1-202ENST00000449666 945 ntBASIC22.67■■□□□ 1.22
PGBD3Q8N328 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PGBD3Q8N328 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PGBD3Q8N328 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC22.67■■□□□ 1.22
PGBD3Q8N328 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PGBD3Q8N328 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
PGBD3Q8N328 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
PGBD3Q8N328 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC22.66■■□□□ 1.22
PGBD3Q8N328 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PGBD3Q8N328 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC22.66■■□□□ 1.22
PGBD3Q8N328 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC22.66■■□□□ 1.22
PGBD3Q8N328 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC22.66■■□□□ 1.22
PGBD3Q8N328 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
PGBD3Q8N328 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
PGBD3Q8N328 AC022211.4-201ENST00000625094 2161 ntBASIC22.66■■□□□ 1.22
PGBD3Q8N328 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PGBD3Q8N328 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PGBD3Q8N328 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PGBD3Q8N328 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC22.65■■□□□ 1.22
PGBD3Q8N328 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC22.65■■□□□ 1.22
PGBD3Q8N328 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC22.65■■□□□ 1.22
PGBD3Q8N328 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC22.65■■□□□ 1.22
PGBD3Q8N328 EI24-204ENST00000527235 1625 ntTSL 5 BASIC22.65■■□□□ 1.22
PGBD3Q8N328 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
PGBD3Q8N328 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
PGBD3Q8N328 AICDA-202ENST00000537228 667 ntTSL 5 BASIC22.65■■□□□ 1.22
PGBD3Q8N328 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
PGBD3Q8N328 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC22.64■■□□□ 1.22
PGBD3Q8N328 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC22.64■■□□□ 1.21
PGBD3Q8N328 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC22.64■■□□□ 1.21
PGBD3Q8N328 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC22.64■■□□□ 1.21
PGBD3Q8N328 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC22.64■■□□□ 1.21
PGBD3Q8N328 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC22.64■■□□□ 1.21
PGBD3Q8N328 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
PGBD3Q8N328 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PGBD3Q8N328 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC22.64■■□□□ 1.21
PGBD3Q8N328 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC22.64■■□□□ 1.21
PGBD3Q8N328 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PGBD3Q8N328 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PGBD3Q8N328 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC22.63■■□□□ 1.21
PGBD3Q8N328 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
PGBD3Q8N328 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
PGBD3Q8N328 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
PGBD3Q8N328 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
PGBD3Q8N328 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PGBD3Q8N328 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC22.63■■□□□ 1.21
PGBD3Q8N328 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
PGBD3Q8N328 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC22.63■■□□□ 1.21
PGBD3Q8N328 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
PGBD3Q8N328 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC22.63■■□□□ 1.21
PGBD3Q8N328 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC22.62■■□□□ 1.21
PGBD3Q8N328 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
PGBD3Q8N328 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
PGBD3Q8N328 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC22.62■■□□□ 1.21
PGBD3Q8N328 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC22.62■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms