Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PRICKLE4Q2TBC4 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PRICKLE4Q2TBC4 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PRICKLE4Q2TBC4 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PRICKLE4Q2TBC4 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.92■□□□□ 0.94
PRICKLE4Q2TBC4 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.92■□□□□ 0.94
PRICKLE4Q2TBC4 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.92■□□□□ 0.94
PRICKLE4Q2TBC4 AL512631.2-201ENST00000604634 923 ntBASIC20.92■□□□□ 0.94
PRICKLE4Q2TBC4 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.92■□□□□ 0.94
PRICKLE4Q2TBC4 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PRICKLE4Q2TBC4 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.92■□□□□ 0.94
PRICKLE4Q2TBC4 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PRICKLE4Q2TBC4 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PRICKLE4Q2TBC4 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PRICKLE4Q2TBC4 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
PRICKLE4Q2TBC4 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PRICKLE4Q2TBC4 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PRICKLE4Q2TBC4 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.91■□□□□ 0.94
PRICKLE4Q2TBC4 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PRICKLE4Q2TBC4 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PRICKLE4Q2TBC4 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.91■□□□□ 0.94
PRICKLE4Q2TBC4 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.91■□□□□ 0.94
PRICKLE4Q2TBC4 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PRICKLE4Q2TBC4 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.91■□□□□ 0.94
PRICKLE4Q2TBC4 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
PRICKLE4Q2TBC4 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PRICKLE4Q2TBC4 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PRICKLE4Q2TBC4 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
PRICKLE4Q2TBC4 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.9■□□□□ 0.94
PRICKLE4Q2TBC4 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.9■□□□□ 0.94
PRICKLE4Q2TBC4 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.9■□□□□ 0.94
PRICKLE4Q2TBC4 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PRICKLE4Q2TBC4 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PRICKLE4Q2TBC4 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.9■□□□□ 0.94
PRICKLE4Q2TBC4 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.9■□□□□ 0.94
PRICKLE4Q2TBC4 LINC01529-204ENST00000636474 1715 ntBASIC20.9■□□□□ 0.94
PRICKLE4Q2TBC4 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
PRICKLE4Q2TBC4 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PRICKLE4Q2TBC4 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PRICKLE4Q2TBC4 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.89■□□□□ 0.93
PRICKLE4Q2TBC4 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PRICKLE4Q2TBC4 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.89■□□□□ 0.93
PRICKLE4Q2TBC4 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PRICKLE4Q2TBC4 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.89■□□□□ 0.93
PRICKLE4Q2TBC4 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PRICKLE4Q2TBC4 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PRICKLE4Q2TBC4 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.89■□□□□ 0.93
PRICKLE4Q2TBC4 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
PRICKLE4Q2TBC4 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRICKLE4Q2TBC4 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
PRICKLE4Q2TBC4 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRICKLE4Q2TBC4 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRICKLE4Q2TBC4 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.88■□□□□ 0.93
PRICKLE4Q2TBC4 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
PRICKLE4Q2TBC4 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.88■□□□□ 0.93
PRICKLE4Q2TBC4 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRICKLE4Q2TBC4 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.88■□□□□ 0.93
PRICKLE4Q2TBC4 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.87■□□□□ 0.93
PRICKLE4Q2TBC4 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
PRICKLE4Q2TBC4 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRICKLE4Q2TBC4 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
PRICKLE4Q2TBC4 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.87■□□□□ 0.93
PRICKLE4Q2TBC4 DUX4L4-201ENST00000566884 1269 ntBASIC20.87■□□□□ 0.93
PRICKLE4Q2TBC4 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PRICKLE4Q2TBC4 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRICKLE4Q2TBC4 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
PRICKLE4Q2TBC4 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
PRICKLE4Q2TBC4 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.86■□□□□ 0.93
PRICKLE4Q2TBC4 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
PRICKLE4Q2TBC4 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.86■□□□□ 0.93
PRICKLE4Q2TBC4 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
PRICKLE4Q2TBC4 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.86■□□□□ 0.93
PRICKLE4Q2TBC4 AC131212.1-201ENST00000613771 668 ntBASIC20.86■□□□□ 0.93
PRICKLE4Q2TBC4 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.86■□□□□ 0.93
PRICKLE4Q2TBC4 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PRICKLE4Q2TBC4 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRICKLE4Q2TBC4 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.86■□□□□ 0.93
PRICKLE4Q2TBC4 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PRICKLE4Q2TBC4 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.86■□□□□ 0.93
PRICKLE4Q2TBC4 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.86■□□□□ 0.93
PRICKLE4Q2TBC4 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRICKLE4Q2TBC4 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PRICKLE4Q2TBC4 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRICKLE4Q2TBC4 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
PRICKLE4Q2TBC4 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.85■□□□□ 0.93
PRICKLE4Q2TBC4 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.85■□□□□ 0.93
PRICKLE4Q2TBC4 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.85■□□□□ 0.93
PRICKLE4Q2TBC4 AC131281.2-201ENST00000520478 145 ntBASIC20.85■□□□□ 0.93
PRICKLE4Q2TBC4 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.85■□□□□ 0.93
PRICKLE4Q2TBC4 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRICKLE4Q2TBC4 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.85■□□□□ 0.93
PRICKLE4Q2TBC4 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
PRICKLE4Q2TBC4 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
PRICKLE4Q2TBC4 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PRICKLE4Q2TBC4 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRICKLE4Q2TBC4 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.84■□□□□ 0.93
PRICKLE4Q2TBC4 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PRICKLE4Q2TBC4 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.84■□□□□ 0.93
PRICKLE4Q2TBC4 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.84■□□□□ 0.93
PRICKLE4Q2TBC4 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms