Protein–RNA interactions for Protein: P55822

SH3BGR, SH3 domain-binding glutamic acid-rich protein, humanhuman

Predicted RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BGRP55822 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SH3BGRP55822 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.19■□□□□ 0.98
SH3BGRP55822 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SH3BGRP55822 AC073130.3-201ENST00000624389 2278 ntBASIC21.19■□□□□ 0.98
SH3BGRP55822 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
SH3BGRP55822 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC21.19■□□□□ 0.98
SH3BGRP55822 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
SH3BGRP55822 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
SH3BGRP55822 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SH3BGRP55822 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SH3BGRP55822 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
SH3BGRP55822 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC21.18■□□□□ 0.98
SH3BGRP55822 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.18■□□□□ 0.98
SH3BGRP55822 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SH3BGRP55822 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SH3BGRP55822 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SH3BGRP55822 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SH3BGRP55822 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.18■□□□□ 0.98
SH3BGRP55822 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SH3BGRP55822 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC21.17■□□□□ 0.98
SH3BGRP55822 AC018755.3-202ENST00000596210 929 ntBASIC21.17■□□□□ 0.98
SH3BGRP55822 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
SH3BGRP55822 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.17■□□□□ 0.98
SH3BGRP55822 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
SH3BGRP55822 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SH3BGRP55822 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SH3BGRP55822 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.17■□□□□ 0.98
SH3BGRP55822 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
SH3BGRP55822 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SH3BGRP55822 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SH3BGRP55822 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
SH3BGRP55822 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SH3BGRP55822 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SH3BGRP55822 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.16■□□□□ 0.98
SH3BGRP55822 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SH3BGRP55822 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SH3BGRP55822 AC129492.7-201ENST00000622992 756 ntBASIC21.16■□□□□ 0.98
SH3BGRP55822 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC21.16■□□□□ 0.98
SH3BGRP55822 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SH3BGRP55822 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SH3BGRP55822 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SH3BGRP55822 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
SH3BGRP55822 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.16■□□□□ 0.98
SH3BGRP55822 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SH3BGRP55822 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SH3BGRP55822 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SH3BGRP55822 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
SH3BGRP55822 AC012354.3-201ENST00000623734 483 ntBASIC21.15■□□□□ 0.98
SH3BGRP55822 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SH3BGRP55822 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.15■□□□□ 0.98
SH3BGRP55822 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SH3BGRP55822 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.14■□□□□ 0.98
SH3BGRP55822 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SH3BGRP55822 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SH3BGRP55822 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
SH3BGRP55822 MIR6765-201ENST00000614092 87 ntBASIC21.14■□□□□ 0.97
SH3BGRP55822 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SH3BGRP55822 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.14■□□□□ 0.97
SH3BGRP55822 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SH3BGRP55822 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SH3BGRP55822 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SH3BGRP55822 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SH3BGRP55822 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SH3BGRP55822 DUX4L9-201ENST00000449051 1259 ntBASIC21.13■□□□□ 0.97
SH3BGRP55822 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
SH3BGRP55822 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
SH3BGRP55822 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SH3BGRP55822 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.13■□□□□ 0.97
SH3BGRP55822 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
SH3BGRP55822 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.13■□□□□ 0.97
SH3BGRP55822 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC21.13■□□□□ 0.97
SH3BGRP55822 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.13■□□□□ 0.97
SH3BGRP55822 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SH3BGRP55822 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
SH3BGRP55822 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SH3BGRP55822 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SH3BGRP55822 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.12■□□□□ 0.97
SH3BGRP55822 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
SH3BGRP55822 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SH3BGRP55822 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SH3BGRP55822 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC21.11■□□□□ 0.97
SH3BGRP55822 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC21.11■□□□□ 0.97
SH3BGRP55822 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
SH3BGRP55822 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SH3BGRP55822 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SH3BGRP55822 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
SH3BGRP55822 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.1■□□□□ 0.97
SH3BGRP55822 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC21.1■□□□□ 0.97
SH3BGRP55822 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
SH3BGRP55822 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SH3BGRP55822 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.1■□□□□ 0.97
SH3BGRP55822 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SH3BGRP55822 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SH3BGRP55822 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SH3BGRP55822 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SH3BGRP55822 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC21.09■□□□□ 0.97
SH3BGRP55822 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.09■□□□□ 0.97
SH3BGRP55822 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
SH3BGRP55822 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC21.09■□□□□ 0.97
SH3BGRP55822 TSPY13P-201ENST00000338964 914 ntBASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms