Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
EPHA4P54764 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
EPHA4P54764 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
EPHA4P54764 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
EPHA4P54764 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
EPHA4P54764 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
EPHA4P54764 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
EPHA4P54764 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.66■■□□□ 1.06
EPHA4P54764 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
EPHA4P54764 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
EPHA4P54764 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
EPHA4P54764 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.65■■□□□ 1.06
EPHA4P54764 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
EPHA4P54764 DUX4L4-201ENST00000566884 1269 ntBASIC21.65■■□□□ 1.06
EPHA4P54764 AL499627.2-201ENST00000606283 725 ntBASIC21.65■■□□□ 1.06
EPHA4P54764 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.65■■□□□ 1.06
EPHA4P54764 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.65■■□□□ 1.06
EPHA4P54764 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.65■■□□□ 1.06
EPHA4P54764 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
EPHA4P54764 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
EPHA4P54764 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.64■■□□□ 1.06
EPHA4P54764 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
EPHA4P54764 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
EPHA4P54764 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.64■■□□□ 1.05
EPHA4P54764 RARRES2P6-201ENST00000567333 442 ntBASIC21.64■■□□□ 1.05
EPHA4P54764 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
EPHA4P54764 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
EPHA4P54764 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
EPHA4P54764 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
EPHA4P54764 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
EPHA4P54764 AC093323.1-202ENST00000635031 2045 ntBASIC21.63■■□□□ 1.05
EPHA4P54764 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.63■■□□□ 1.05
EPHA4P54764 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
EPHA4P54764 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
EPHA4P54764 AC144652.1-201ENST00000609974 1624 ntBASIC21.63■■□□□ 1.05
EPHA4P54764 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.63■■□□□ 1.05
EPHA4P54764 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
EPHA4P54764 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.63■■□□□ 1.05
EPHA4P54764 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.62■■□□□ 1.05
EPHA4P54764 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
EPHA4P54764 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.62■■□□□ 1.05
EPHA4P54764 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.62■■□□□ 1.05
EPHA4P54764 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
EPHA4P54764 AC133637.1-201ENST00000624115 1537 ntBASIC21.61■■□□□ 1.05
EPHA4P54764 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
EPHA4P54764 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.61■■□□□ 1.05
EPHA4P54764 LINC01124-201ENST00000409786 2117 ntBASIC21.61■■□□□ 1.05
EPHA4P54764 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
EPHA4P54764 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.61■■□□□ 1.05
EPHA4P54764 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
EPHA4P54764 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
EPHA4P54764 LINC01529-204ENST00000636474 1715 ntBASIC21.6■■□□□ 1.05
EPHA4P54764 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.6■■□□□ 1.05
EPHA4P54764 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
EPHA4P54764 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
EPHA4P54764 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
EPHA4P54764 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
EPHA4P54764 AL139125.2-201ENST00000623134 1869 ntBASIC21.6■■□□□ 1.05
EPHA4P54764 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
EPHA4P54764 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
EPHA4P54764 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
EPHA4P54764 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.59■■□□□ 1.05
EPHA4P54764 IRS3P-201ENST00000223076 1006 ntBASIC21.59■■□□□ 1.05
EPHA4P54764 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
EPHA4P54764 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.59■■□□□ 1.05
EPHA4P54764 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
EPHA4P54764 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
EPHA4P54764 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
EPHA4P54764 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.59■■□□□ 1.05
EPHA4P54764 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.59■■□□□ 1.05
EPHA4P54764 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
EPHA4P54764 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
EPHA4P54764 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
EPHA4P54764 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.58■■□□□ 1.05
EPHA4P54764 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
EPHA4P54764 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.58■■□□□ 1.05
EPHA4P54764 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
EPHA4P54764 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.58■■□□□ 1.05
EPHA4P54764 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.58■■□□□ 1.05
EPHA4P54764 AC026271.2-201ENST00000428091 497 ntBASIC21.58■■□□□ 1.05
EPHA4P54764 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
EPHA4P54764 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.58■■□□□ 1.04
EPHA4P54764 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
EPHA4P54764 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
EPHA4P54764 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
EPHA4P54764 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
EPHA4P54764 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
EPHA4P54764 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.57■■□□□ 1.04
EPHA4P54764 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.57■■□□□ 1.04
EPHA4P54764 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
EPHA4P54764 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
EPHA4P54764 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
EPHA4P54764 SLC47A1P1-202ENST00000449666 945 ntBASIC21.57■■□□□ 1.04
EPHA4P54764 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.57■■□□□ 1.04
EPHA4P54764 AC126544.1-201ENST00000580842 1059 ntBASIC21.57■■□□□ 1.04
EPHA4P54764 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.57■■□□□ 1.04
EPHA4P54764 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
EPHA4P54764 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
EPHA4P54764 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.56■■□□□ 1.04
EPHA4P54764 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms