Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
HMGCLP35914 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC22.38■■□□□ 1.17
HMGCLP35914 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC22.38■■□□□ 1.17
HMGCLP35914 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
HMGCLP35914 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
HMGCLP35914 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.38■■□□□ 1.17
HMGCLP35914 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
HMGCLP35914 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
HMGCLP35914 NFE2L3P1-201ENST00000588207 1959 ntBASIC22.38■■□□□ 1.17
HMGCLP35914 DUSP8P3-201ENST00000399571 1760 ntBASIC22.38■■□□□ 1.17
HMGCLP35914 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
HMGCLP35914 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
HMGCLP35914 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
HMGCLP35914 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC22.37■■□□□ 1.17
HMGCLP35914 RARA-203ENST00000394086 2008 ntTSL 2 BASIC22.37■■□□□ 1.17
HMGCLP35914 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
HMGCLP35914 SRD5A1P1-201ENST00000442297 786 ntBASIC22.37■■□□□ 1.17
HMGCLP35914 AC241377.3-202ENST00000626088 1088 ntBASIC22.37■■□□□ 1.17
HMGCLP35914 AC241585.3-202ENST00000628937 1088 ntBASIC22.37■■□□□ 1.17
HMGCLP35914 AC245100.8-202ENST00000629247 1058 ntBASIC22.37■■□□□ 1.17
HMGCLP35914 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
HMGCLP35914 CASK-201ENST00000378154 2494 ntTSL 5 BASIC22.37■■□□□ 1.17
HMGCLP35914 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
HMGCLP35914 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
HMGCLP35914 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
HMGCLP35914 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
HMGCLP35914 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC22.36■■□□□ 1.17
HMGCLP35914 DUX4L4-201ENST00000566884 1269 ntBASIC22.36■■□□□ 1.17
HMGCLP35914 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC22.36■■□□□ 1.17
HMGCLP35914 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC22.36■■□□□ 1.17
HMGCLP35914 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
HMGCLP35914 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC22.35■■□□□ 1.17
HMGCLP35914 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
HMGCLP35914 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC22.35■■□□□ 1.17
HMGCLP35914 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
HMGCLP35914 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
HMGCLP35914 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
HMGCLP35914 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
HMGCLP35914 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC22.35■■□□□ 1.17
HMGCLP35914 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC22.35■■□□□ 1.17
HMGCLP35914 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
HMGCLP35914 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC22.35■■□□□ 1.17
HMGCLP35914 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
HMGCLP35914 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC22.35■■□□□ 1.17
HMGCLP35914 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
HMGCLP35914 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
HMGCLP35914 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
HMGCLP35914 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC22.34■■□□□ 1.17
HMGCLP35914 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC22.34■■□□□ 1.17
HMGCLP35914 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
HMGCLP35914 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC22.34■■□□□ 1.17
HMGCLP35914 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC22.34■■□□□ 1.17
HMGCLP35914 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC22.34■■□□□ 1.17
HMGCLP35914 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
HMGCLP35914 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
HMGCLP35914 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC22.34■■□□□ 1.17
HMGCLP35914 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC22.34■■□□□ 1.17
HMGCLP35914 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
HMGCLP35914 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
HMGCLP35914 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
HMGCLP35914 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC22.33■■□□□ 1.17
HMGCLP35914 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC22.33■■□□□ 1.16
HMGCLP35914 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.16
HMGCLP35914 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
HMGCLP35914 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
HMGCLP35914 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
HMGCLP35914 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
HMGCLP35914 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
HMGCLP35914 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC22.32■■□□□ 1.16
HMGCLP35914 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
HMGCLP35914 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
HMGCLP35914 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
HMGCLP35914 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC22.32■■□□□ 1.16
HMGCLP35914 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC22.31■■□□□ 1.16
HMGCLP35914 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC22.31■■□□□ 1.16
HMGCLP35914 AC092171.4-201ENST00000609130 632 ntBASIC22.31■■□□□ 1.16
HMGCLP35914 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
HMGCLP35914 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
HMGCLP35914 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC22.31■■□□□ 1.16
HMGCLP35914 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
HMGCLP35914 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
HMGCLP35914 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
HMGCLP35914 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
HMGCLP35914 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
HMGCLP35914 AL136116.3-201ENST00000402907 1138 ntBASIC22.3■■□□□ 1.16
HMGCLP35914 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC22.3■■□□□ 1.16
HMGCLP35914 AC099791.2-201ENST00000605725 427 ntBASIC22.3■■□□□ 1.16
HMGCLP35914 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC22.3■■□□□ 1.16
HMGCLP35914 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
HMGCLP35914 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC22.3■■□□□ 1.16
HMGCLP35914 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
HMGCLP35914 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
HMGCLP35914 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC22.29■■□□□ 1.16
HMGCLP35914 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
HMGCLP35914 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
HMGCLP35914 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC22.29■■□□□ 1.16
HMGCLP35914 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC22.29■■□□□ 1.16
HMGCLP35914 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC22.29■■□□□ 1.16
HMGCLP35914 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
HMGCLP35914 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC22.28■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms